About   Help   FAQ
Dnaaf4 Gene Detail
Summary
  • Symbol
    Dnaaf4
  • Name
    dynein axonemal assembly factor 4
  • Synonyms
    1700010I24Rik, b2b811Clo, Dyx1c1, EKN1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914935
    NCBI Gene: 67685
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr9:72866067-72880346 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 40.08 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    44 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914935
 protein coding gene Chr9:72863574-72880971 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035020
 protein coding gene Chr9:73160963-73175424 (+)
A/J MGP_AJ_G0035001
 protein coding gene Chr9:70603766-70618399 (+)
AKR/J MGP_AKRJ_G0034930
 protein coding gene Chr9:72297932-72312349 (+)
BALB/cJ MGP_BALBcJ_G0034993
 protein coding gene Chr9:70310925-70327740 (+)
C3H/HeJ MGP_C3HHeJ_G0034702
 protein coding gene Chr9:72787796-72803613 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035512
 protein coding gene Chr9:75085124-75099588 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032423
 protein coding gene Chr9:70079067-70094641 (+)
CAST/EiJ MGP_CASTEiJ_G0034024
 protein coding gene Chr9:73125791-73142444 (+)
CBA/J MGP_CBAJ_G0034675
 protein coding gene Chr9:77705467-77719786 (+)
DBA/2J MGP_DBA2J_G0034834
 protein coding gene Chr9:70321424-70335699 (+)
FVB/NJ MGP_FVBNJ_G0034776
 protein coding gene Chr9:69632101-69646432 (+)
LP/J MGP_LPJ_G0034915
 protein coding gene Chr9:73387758-73402074 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034817
 protein coding gene Chr9:78783301-78798160 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035534
 protein coding gene Chr9:72448596-72463473 (+)
PWK/PhJ MGP_PWKPhJ_G0033728
 protein coding gene Chr9:70599967-70614343 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033561
 protein coding gene Chr9:72739455-72753336 (+)
WSB/EiJ MGP_WSBEiJ_G0034136
 protein coding gene Chr9:72385369-72399575 (+)



Homology
more
  • Human Ortholog
    DNAAF4, dynein axonemal assembly factor 4
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    DNAAF4, dynein axonemal assembly factor 4
  • Synonyms
    CILD25, DYX1, DYX1C1, DYXC1, EKN1, pf23, RD
  • Links
    NCBI Gene ID: 161582
    neXtProt AC: NX_Q8WXU2
    UniProt: Q8WXU2

  • Chr Location
    15q21.3; chr15:55410525-55508234 (-)  GRCh38
Human Diseases
more
  • Diseases
    2 with Dnaaf4 mouse models; 2 with human DNAAF4 associations

Human Disease Mouse Models
      
IDs
 View 1 model
      
IDs
 View 1 model
      
IDs
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    2 with disease annotations
  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    33 phenotypes from 3 alleles in 3 genetic backgrounds
    17 images
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit both pre- and postnatal lethality, hydrocephalus, and defects in organ laterality and ciliary motility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    46
  • GO References
    11
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    734
  • Tissues
    19
  • cDNA Data
    12
  • Literature Summary
    4
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000092192 Ensembl Gene Model | MGI Sequence Detail 14280 C57BL/6J ±  kb
    transcript ENSMUST00000034734 Ensembl | MGI Sequence Detail 1975 Not Applicable  
    polypeptide ENSMUSP00000034734 Ensembl | MGI Sequence Detail 420 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 13
      cDNA 12
      Primer pair 1

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:5311341
    References
    more
    • Summaries
      All 41
      Developmental Gene Expression 4
      Diseases 2
      Gene Ontology 11
      Phenotypes 9
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:294106 Soulez M, et al., Reevaluation of the Role of Extracellular Signal-Regulated Kinase 3 in Perinatal Survival and Postnatal Growth Using New Genetically Engineered Mouse Models. Mol Cell Biol. 2019 Mar 15;39(6)
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
    Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory