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Yipf5 Gene Detail
Summary
  • Symbol
    Yipf5
  • Name
    Yip1 domain family, member 5
  • Synonyms
    2610311I19Rik, Yip1a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914430
    NCBI Gene: 67180
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:40337918-40352452 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 21.28 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    405 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914430
 protein coding gene Chr18:40336949-40352482 (-)
129S1/SvImJ ENSMUSG00200041510
 protein coding gene Chr18:37341936-37357469 (-)
A/J ENSMUSG00195033659
 protein coding gene Chr18:37494460-37509995 (-)
AKR/J ENSMUSG00220016014
 protein coding gene Chr18:37463250-37478783 (-)
BALB/cJ ENSMUSG00180016656
 protein coding gene Chr18:37944083-37959616 (-)
C3H/HeJ ENSMUSG00175034827
 protein coding gene Chr18:37461374-37476907 (-)
C57BL/6NJ ENSMUSG00215009283
 protein coding gene Chr18:37208321-37223860 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022218
 protein coding gene Chr18:37379511-37395461 (-)
CAST/EiJ ENSTCUG00005023187
 protein coding gene Chr18:37080330-37096038 (-)
CBA/J ENSMUSG00210020989
 protein coding gene Chr18:37485958-37501491 (-)
DBA/2J ENSMUSG00185017771
 protein coding gene Chr18:37420522-37436055 (-)
FVB/NJ ENSMUSG00205016085
 protein coding gene Chr18:37120737-37136271 (-)
JF1/MsJ ENSUMUG00000022072
 protein coding gene Chr18:37564176-37579887 (-)
LP/J ENSMUSG00230042205
 protein coding gene Chr18:39536789-39552322 (-)
NOD/ShiLtJ ENSMUSG00190019174
 protein coding gene Chr18:37209947-37225479 (-)
NZO/HlLtJ ENSMUSG00225046296
 protein coding gene Chr18:39439533-39455066 (-)
PWK/PhJ ENSLUMG00010010939
 protein coding gene Chr18:37722016-37737736 (-)
SPRET/EiJ ENSMSPG00010018930
 protein coding gene Chr18:37781012-37797590 (-)
WSB/EiJ ENSIUOG00005007326
 protein coding gene Chr18:37197905-37213421 (-)



Homology
more
  • Human Ortholog
    YIPF5, Yip1 domain family member 5
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    YIPF5, Yip1 domain family member 5
  • Synonyms
    FinGER5, MEDS2, SB140, SMAP-5, SMAP5, YIP1A, YIPFalpha1A
  • Links
    NCBI Gene ID: 81555
    UniProt: Q969M3

  • Chr Location
    5q31.3; chr5:144158162-144170714 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    29
  • GO References
    11
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    632
  • Tissues
    12
  • cDNA Data
    19
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 67180 NCBI Gene Model | MGI Sequence Detail 14535 C57BL/6J ±  kb
    transcript NM_023311 RefSeq | MGI Sequence Detail 2329 C57BL/6  
    polypeptide Q9EQQ2 UniProt | EBI | MGI Sequence Detail 257 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 21
      cDNA 20
      Primer pair 1

      Microarray probesets 9
    Other
    Accession IDs
    less
    MGI:2147166
    References
    more
    • Summaries
      All 41
      Developmental Gene Expression 2
      Gene Ontology 11
      Phenotypes 10
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory