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Lce1a1 Gene Detail
Summary
  • Symbol
    Lce1a1
  • Name
    late cornified envelope 1A1
  • Synonyms
    2200008B06Rik, Sprrl3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914377
    NCBI Gene: 67127
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:92553842-92555614 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 40.14 cM, cytoband F2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    28 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914377
 protein coding gene Chr3:92553839-92555614 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027506
 protein coding gene Chr3:93101759-93104255 (-)
A/J MGP_AJ_G0027473
 protein coding gene Chr3:90172614-90174231 (-)
AKR/J MGP_AKRJ_G0027438
 protein coding gene Chr3:92289130-92290862 (-)
BALB/cJ MGP_BALBcJ_G0027481
 protein coding gene Chr3:89982741-89984470 (-)
C3H/HeJ MGP_C3HHeJ_G0027221
 protein coding gene Chr3:92510857-92512597 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027925
 protein coding gene Chr3:96648028-96650049 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025275
 protein coding gene Chr3:86802099-86803912 (-)
CAST/EiJ MGP_CASTEiJ_G0026669
 protein coding gene Chr3:91922982-91926159 (-)
CBA/J MGP_CBAJ_G0027195
 protein coding gene Chr3:99966479-99968220 (-)
DBA/2J MGP_DBA2J_G0027333
 protein coding gene Chr3:89494693-89496719 (-)
FVB/NJ MGP_FVBNJ_G0027301
 protein coding gene Chr3:87662867-87664639 (-)
LP/J MGP_LPJ_G0027441
 protein coding gene Chr3:94321423-94324247 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027326
 protein coding gene Chr3:106245973-106247740 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027984
 protein coding gene Chr3:92017930-92019671 (-)
PWK/PhJ MGP_PWKPhJ_G0026402
 protein coding gene Chr3:89374951-89376772 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026220
 protein coding gene Chr3:90347551-90349675 (-)
WSB/EiJ MGP_WSBEiJ_G0026751
 protein coding gene Chr3:92398103-92403794 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Lce1a1
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    7 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    16
  • Literature Summary
    2
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057609 Ensembl Gene Model | MGI Sequence Detail 1773 C57BL/6J ±  kb
transcript ENSMUST00000074142 Ensembl | MGI Sequence Detail 705 Not Applicable  
polypeptide ENSMUSP00000073776 Ensembl | MGI Sequence Detail 143 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR028205 Late cornified envelope protein
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 5
References
more
  • Summaries
    All 25
    Developmental Gene Expression 2
    Diseases 1
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory