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Rsph3a Gene Detail
Summary
  • Symbol
    Rsph3a
  • Name
    radial spoke 3A homolog (Chlamydomonas)
  • Synonyms
    1700012G05Rik, 4930524H12Rik, Rshl2, Rshl2a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914082
    NCBI Gene: 66832
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:8164446-8198388 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 4.82 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    67 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914082
 protein coding gene Chr17:8164446-8198656 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023122
 protein coding gene Chr17:5196977-5230944 (+)
A/J MGP_AJ_G0023086
 protein coding gene Chr17:4107230-4195255 (-)
AKR/J MGP_AKRJ_G0023053
 protein coding gene Chr17:4207991-4285590 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0022858
 protein coding gene Chr17:5364470-5421535 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0021035
 protein coding gene Chr17:3426094-3460940 (-)
CAST/EiJ MGP_CASTEiJ_G0022369
 protein coding gene Chr17:5157652-5208369 (+)
CBA/J MGP_CBAJ_G0022828
 protein coding gene Chr17:5831577-5890409 (+)
DBA/2J MGP_DBA2J_G0022953
 protein coding gene Chr17:4071657-4118994 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0023021
 protein coding gene Chr17:4232398-4277403 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022953
 protein coding gene Chr17:5590160-5625773 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023562
 protein coding gene Chr17:5326068-5406641 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0021939
 protein coding gene Chr17:3855382-3905916 (-)
WSB/EiJ MGP_WSBEiJ_G0022425
 protein coding gene Chr17:5426085-5463542 (+)



Homology
more
  • Human Ortholog
    RSPH3, radial spoke head 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RSPH3, radial spoke head 3
  • Synonyms
    CILD32, dJ111C20.1, RSHL2, RSP3
  • Links
    NCBI Gene ID: 83861
    neXtProt AC: NX_Q86UC2
    UniProt: Q86UC2

  • Chr Location
    6q25.3; chr6:158962980-159000202 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human RSPH3 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

  • References
    6 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    334 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    744
  • Tissues
    10
  • cDNA Data
    7
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66832 NCBI Gene Model | MGI Sequence Detail 33943 C57BL/6J ±  kb
transcript NM_025789 RefSeq | MGI Sequence Detail 1960 C57BL/6  
polypeptide Q3UFY4 UniProt | EBI | MGI Sequence Detail 516 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 9
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:1923954, MGI:2147155
References
more
  • Summaries
    All 360
    Developmental Gene Expression 3
    Diseases 6
    Gene Ontology 4
    Phenotypes 334
  • Earliest
    J:30229 Davisson MT, et al., Segmental trisomy as a mouse model for Down syndrome. Prog Clin Biol Res. 1993;384:117-33
  • Latest
    J:346702 Colombi I, et al., Heterogeneous subpopulations of GABA(A)R-responding neurons coexist across neuronal network scales and developmental stages in health and disease. iScience. 2024 Apr 19;27(4):109438
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory