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Rex1bd Gene Detail
Summary
  • Symbol
    Rex1bd
  • Name
    required for excision 1-B domain containing
  • Synonyms
    2810428I15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913712
    NCBI Gene: 66462
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:70956945-70959402 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 34.15 cM, cytoband C1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    19 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913712
 protein coding gene Chr8:70956942-70959402 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033708
 protein coding gene Chr8:70772579-70775039 (-)
A/J MGP_AJ_G0033691
 protein coding gene Chr8:67901566-67904026 (-)
AKR/J MGP_AKRJ_G0033616
 protein coding gene Chr8:69829923-69832383 (-)
BALB/cJ MGP_BALBcJ_G0033687
 protein coding gene Chr8:68118780-68121240 (-)
C3H/HeJ MGP_C3HHeJ_G0033397
 protein coding gene Chr8:70475671-70478131 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034204
 protein coding gene Chr8:73452199-73454659 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031148
 protein coding gene Chr8:62716190-62718620 (-)
CAST/EiJ MGP_CASTEiJ_G0032722
 protein coding gene Chr8:69961270-69963730 (-)
CBA/J MGP_CBAJ_G0033375
 protein coding gene Chr8:76082820-76085280 (-)
DBA/2J MGP_DBA2J_G0033529
 protein coding gene Chr8:67619062-67621522 (-)
FVB/NJ MGP_FVBNJ_G0033470
 protein coding gene Chr8:66734520-66736980 (-)
LP/J MGP_LPJ_G0033616
 protein coding gene Chr8:70799668-70802128 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033513
 protein coding gene Chr8:78759843-78762303 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034222
 protein coding gene Chr8:70018016-70020476 (-)
PWK/PhJ MGP_PWKPhJ_G0032430
 protein coding gene Chr8:66917251-66919711 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032266
 protein coding gene Chr8:68982488-68984933 (-)
WSB/EiJ MGP_WSBEiJ_G0032837
 protein coding gene Chr8:70376535-70378995 (-)



Homology
more
  • Human Ortholog
    REX1BD, required for excision 1-B domain containing
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    REX1BD, required for excision 1-B domain containing
  • Synonyms
    C19orf60
  • Links
    NCBI Gene ID: 55049
    neXtProt AC: NX_Q96EN9
    UniProt: Q96EN9

  • Chr Location
    19p13.11; chr19:18588685-18592337 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    6
  • Genomic Mutations
    1 involving Rex1bd
  • Find Mice (IMSR)
    4 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    83
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66462 NCBI Gene Model | MGI Sequence Detail 2458 C57BL/6J ±  kb
transcript NM_025577 RefSeq | MGI Sequence Detail 683 C57BL/6  
polypeptide Q9CYZ6 UniProt | EBI | MGI Sequence Detail 169 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000059999 required for excision 1-B domain-containing protein
    (term hierarchy)
  • InterPro Domains
    IPR039491 Required for excision 1-B domain-containing protein
Molecular
Reagents
less
  • All nucleic 84
    cDNA 84

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory