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Cdrt4 Gene Detail
Summary
  • Symbol
    Cdrt4
  • Name
    CMT1A duplicated region transcript 4
  • Synonyms
    1700019I23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913588
    NCBI Gene: 66338
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:62842019-62883921 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 38.84 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    297 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913588
 protein coding gene Chr11:62842019-62883921 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018466
 protein coding gene Chr11:63044284-63082529 (+)
A/J MGP_AJ_G0018435
 protein coding gene Chr11:60704605-60740613 (+)
AKR/J MGP_AKRJ_G0018404
 protein coding gene Chr11:62569742-62611467 (+)
BALB/cJ MGP_BALBcJ_G0018406
 protein coding gene Chr11:60976762-61013720 (+)
C3H/HeJ MGP_C3HHeJ_G0018219
 protein coding gene Chr11:62546045-62582146 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018858
 protein coding gene Chr11:65011391-65054577 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016502
 protein coding gene Chr11:57775579-57809955 (+)
CAST/EiJ MGP_CASTEiJ_G0017775
 protein coding gene Chr11:62702644-62740036 (+)
CBA/J MGP_CBAJ_G0018193
 protein coding gene Chr11:67812540-67854032 (+)
DBA/2J MGP_DBA2J_G0018302
 protein coding gene Chr11:60254221-60293760 (+)
FVB/NJ MGP_FVBNJ_G0018292
 protein coding gene Chr11:59916460-59959887 (+)
LP/J MGP_LPJ_G0018374
 protein coding gene Chr11:63573612-63616706 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018316
 protein coding gene Chr11:68789984-68829894 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018899
 protein coding gene Chr11:62730095-62769511 (+)
PWK/PhJ MGP_PWKPhJ_G0017549
 protein coding gene Chr11:60871217-60906773 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017339
 protein coding gene Chr11:62578159-62614737 (+)
WSB/EiJ MGP_WSBEiJ_G0017828
 protein coding gene Chr11:62343573-62380954 (+)



Homology
more
  • Human Ortholog
    CDRT4, CMT1A duplicated region transcript 4
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CDRT4, CMT1A duplicated region transcript 4
  • Links
    NCBI Gene ID: 284040
    neXtProt AC: NX_Q8N9R6
    UniProt: Q8N9R6

  • Chr Location
    chr17:15436015-15475728 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    4
  • Targeted
    2
  • Genomic Mutations
    1 involving Cdrt4
  • Find Mice (IMSR)
    10 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    19
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66338 NCBI Gene Model | MGI Sequence Detail 41903 C57BL/6J ±  kb
transcript NM_025496 RefSeq | MGI Sequence Detail 723 C57BL/6  
polypeptide Q9DA64 UniProt | EBI | MGI Sequence Detail 179 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 20
    Genomic 1
    cDNA 19

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Phenotypes 7
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory