Tma7 MGI Mouse Gene Detail - MGI:1913417 - translational machinery associated 7

Sequence Map

Chr9:108907056-108911449 bp, - strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1913417	protein coding gene	Chr9:108903636-108911655 (-)
129S1/SvImJ	ENSMUSG00200039378	protein coding gene	Chr9:106100383-106108407 (-)
A/J	ENSMUSG00195039635	protein coding gene	Chr9:105319601-105327625 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180024435	protein coding gene	Chr9:105636079-105644104 (-)
C3H/HeJ	ENSMUSG00175032505	protein coding gene	Chr9:105978322-105986346 (-)
C57BL/6NJ	ENSMUSG00215033954	protein coding gene	Chr9:105956954-105964973 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0032716	protein coding gene	Chr9:104354573-104362614 (-)
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210030370	protein coding gene	Chr9:105827915-105835941 (-)
DBA/2J	ENSMUSG00185035845	protein coding gene	Chr9:105987761-105995785 (-)
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	ENSMUSG00230043395	protein coding gene	Chr9:106129185-106137209 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225023100	protein coding gene	Chr9:106360950-106368974 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Vertebrate Orthology Source

Alliance of Genome Resources

MGI Vertebrate Homology

Tma7 stringent orthology
2 human;1 mouse;2 rat;1 zebrafish
HCOP

vertebrate homology predictions: TMA7, TMA7B
Gene Tree

Tma7

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	66167	NCBI Gene Model \| MGI Sequence Detail	4394	C57BL/6J	± kb
transcript	NM_183250	RefSeq \| MGI Sequence Detail	637	C57BL/6
polypeptide	Q8K003	UniProt \| EBI \| MGI Sequence Detail	64	Not Applicable

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UniProt

3 Sequences
Protein Ontology

PR:000031672 translation machinery-associated protein 7

(term hierarchy)
InterPro Domains

IPR015157 Translation machinery associated TMA7

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Summaries

All 24

Developmental Gene Expression 2

Phenotypes 4
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:210222 Hupe M, et al., Evaluation of TRAP-sequencing technology with a versatile conditional mouse model. Nucleic Acids Res. 2014 Jan;42(2):e14

TSS for Tma7:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr91582	Chr9:108911440-108911482 (-)	-12 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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