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Zim1 Gene Detail
Summary
  • Symbol
    Zim1
  • Name
    zinc finger, imprinted 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1341879
    NCBI Gene: 22776
  • Alliance
    genome feature page
  • Transcription Start Sites
    12 TSS
  • Regulated by
    Rr88 (1 regulatory region)
Location &
Maps
more
  • Sequence Map
    Chr7:6677443-6699521 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 3.87 cM
  • Mapping Data
    6 experiments
Strain
Comparison
more
  • SNPs within 2kb
    677 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1341879
 protein coding gene Chr7:6674268-6699521 (-)
129S1/SvImJ ENSMUSG00200039788
 protein coding gene Chr7:3554951-3580131 (-)
A/J ENSMUSG00195051952
 protein coding gene Chr7:3406094-3431281 (-)
AKR/J ENSMUSG00220021501
 protein coding gene Chr7:1040928-1066127 (-)
BALB/cJ ENSMUSG00180044839
 protein coding gene Chr7:3361357-3386543 (-)
C3H/HeJ ENSMUSG00175046485
 protein coding gene Chr7:3286326-3311527 (-)
C57BL/6NJ ENSMUSG00215038457
 protein coding gene Chr7:3432183-3457364 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029171
 protein coding gene Chr7:3346982-3372519 (-)
CAST/EiJ ENSTCUG00005023961
 protein coding gene Chr7:3489803-3515001 (-)
CBA/J ENSMUSG00210033879
 protein coding gene Chr7:3317501-3342688 (-)
DBA/2J ENSMUSG00185041238
 protein coding gene Chr7:3546781-3571987 (-)
FVB/NJ ENSMUSG00205024124
 protein coding gene Chr7:3174659-3199848 (-)
JF1/MsJ ENSUMUG00000021973
 protein coding gene Chr7:3624446-3649893 (-)
LP/J ENSMUSG00230037661
 protein coding gene Chr7:6560546-6585729 (-)
NOD/ShiLtJ ENSMUSG00190048307
 protein coding gene Chr7:3439748-3464922 (-)
NZO/HlLtJ ENSMUSG00225017718
 protein coding gene Chr7:4404029-4429227 (-)
PWK/PhJ ENSLUMG00010048525
 protein coding gene Chr7:7097687-7118026 (-)
SPRET/EiJ ENSMSPG00010045687
 protein coding gene Chr7:3160603-3180114 (-)
WSB/EiJ ENSIUOG00005048969
 protein coding gene Chr7:3315589-3340787 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    832
  • Tissues
    100
  • cDNA Data
    11
  • Literature Summary
    18
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 22776 NCBI Gene Model | MGI Sequence Detail 22079 C57BL/6J ±  kb
    transcript NM_011769 RefSeq | MGI Sequence Detail 3528 ZRU/MplStud  
    polypeptide NP_035899 RefSeq | MGI Sequence Detail 579 ZRU/MplStud  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      4 Sequences
    • InterPro Domains
      IPR050329 GLI C2H2-type zinc-finger
      IPR001909 Krueppel-associated box
      IPR036051 Krueppel-associated box domain superfamily
      IPR036236 Zinc finger C2H2 superfamily
      IPR013087 Zinc finger C2H2-type
    Molecular
    Reagents
    less
    • All nucleic 21
      Genomic 4
      cDNA 11
      Primer pair 4
      Other 2

      Microarray probesets 2
    References
    more
    • Summaries
      All 47
      Developmental Gene Expression 18
      Gene Ontology 3
      Phenotypes 6
    • Earliest
      J:54552 Kim J, et al., Zim1, a maternally expressed mouse Kruppel-type zinc-finger gene located in proximal chromosome 7. Hum Mol Genet. 1999 May;8(5):847-54
    • Latest
      J:302583 Jiang W, et al., ZFP57 dictates allelic expression switch of target imprinted genes. Proc Natl Acad Sci U S A. 2021 Feb 2;118(5):e2005377118
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory