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Pdcd11 Gene Detail
Summary
  • Symbol
    Pdcd11
  • Name
    programmed cell death 11
  • Synonyms
    1110021I22Rik, ALG-4, mKIAA0185
  • Feature Type
    protein coding gene
  • IDs
    MGI:1341788
    NCBI Gene: 18572
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:47079183-47119585 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 39.24 cM, cytoband D2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1190 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1341788
 protein coding gene Chr19:47079183-47120304 (+)
129S1/SvImJ ENSMUSG00200020347
 protein coding gene Chr19:43785543-43826487 (+)
A/J ENSMUSG00195016635
 protein coding gene Chr19:43916161-43957161 (+)
AKR/J ENSMUSG00220018579
 protein coding gene Chr19:43721311-43762309 (+)
BALB/cJ ENSMUSG00180017092
 protein coding gene Chr19:44168202-44209198 (+)
C3H/HeJ ENSMUSG00175005984
 protein coding gene Chr19:43714250-43755264 (+)
C57BL/6NJ ENSMUSG00215004662
 protein coding gene Chr19:43777954-43819054 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023050
 protein coding gene Chr19:43768673-43810178 (+)
CAST/EiJ ENSTCUG00005015313
 protein coding gene Chr19:43375211-43416499 (+)
CBA/J ENSMUSG00210018036
 protein coding gene Chr19:43793744-43834758 (+)
DBA/2J ENSMUSG00185008383
 protein coding gene Chr19:44291571-44332570 (+)
FVB/NJ ENSMUSG00205029430
 protein coding gene Chr19:43209548-43250561 (+)
JF1/MsJ ENSUMUG00000028652
 protein coding gene Chr19:44451135-44491737 (+)
LP/J ENSMUSG00230023831
 protein coding gene Chr19:45055126-45096067 (+)
NOD/ShiLtJ ENSMUSG00190004928
 protein coding gene Chr19:43658062-43699062 (+)
NZO/HlLtJ ENSMUSG00225043903
 protein coding gene Chr19:48650932-48691945 (+)
PWK/PhJ ENSLUMG00010001103
 protein coding gene Chr19:43616967-43657980 (+)
SPRET/EiJ ENSMSPG00010007302
 protein coding gene Chr19:43349830-43390796 (+)
WSB/EiJ ENSIUOG00005005888
 protein coding gene Chr19:43162883-43204111 (+)



Homology
more
  • Human Ortholog
    PDCD11, programmed cell death 11
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PDCD11, programmed cell death 11
  • Synonyms
    ALG-4, ALG4, NFBP, RRP5
  • Links
    NCBI Gene ID: 22984
    UniProt: Q14690

  • Chr Location
    10q24.33; chr10:103396626-103446297 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    15
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    634
  • Tissues
    33
  • cDNA Data
    16
  • Literature Summary
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 18572 NCBI Gene Model | MGI Sequence Detail 40403 C57BL/6J ±  kb
transcript NM_011053 RefSeq | MGI Sequence Detail 6062 C57BL/6  
polypeptide Q6NS46 UniProt | EBI | MGI Sequence Detail 1862 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 16
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:1920991
References
more
  • Summaries
    All 43
    Developmental Gene Expression 5
    Gene Ontology 6
    Phenotypes 9
  • Earliest
    J:47659 Sasaki N, et al., Characterization of gene expression in mouse blastocyst using single-pass sequencing of 3995 clones. (Errata 1998;54:583). Genomics. 1998 Apr 15;49(2):167-79
  • Latest
    J:224530 Dietrich JE, et al., Venus trap in the mouse embryo reveals distinct molecular dynamics underlying specification of first embryonic lineages. EMBO Rep. 2015 Aug;16(8):1005-21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory