About   Help   FAQ
Msc Gene Detail
Summary
  • Symbol
    Msc
  • Name
    musculin
  • Synonyms
    bHLHa22, MyoR
  • Feature Type
    protein coding gene
  • IDs
    MGI:1333884
    NCBI Gene: 17681
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:14823570-14826216 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 4.50 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    75 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1333884
 protein coding gene Chr1:14823570-14826216 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015846
 protein coding gene Chr1:12184462-12187114 (-)
A/J MGP_AJ_G0015828
 protein coding gene Chr1:12072305-12074951 (-)
AKR/J MGP_AKRJ_G0015787
 protein coding gene Chr1:12057199-12059845 (-)
BALB/cJ MGP_BALBcJ_G0015784
 protein coding gene Chr1:11782545-11785191 (-)
C3H/HeJ MGP_C3HHeJ_G0015618
 protein coding gene Chr1:12048744-12051390 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016238
 protein coding gene Chr1:12727513-12730159 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013959
 protein coding gene Chr1:10658567-10661204 (-)
CAST/EiJ MGP_CASTEiJ_G0015198
 protein coding gene Chr1:12175297-12177944 (-)
CBA/J MGP_CBAJ_G0015591
 protein coding gene Chr1:13024882-13027528 (-)
DBA/2J MGP_DBA2J_G0015690
 protein coding gene Chr1:11699780-11702428 (-)
FVB/NJ MGP_FVBNJ_G0015695
 protein coding gene Chr1:11492981-11495627 (-)
LP/J MGP_LPJ_G0015762
 protein coding gene Chr1:12379492-12382144 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015714
 protein coding gene Chr1:13719995-13722641 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016285
 protein coding gene Chr1:11984881-11987527 (-)
PWK/PhJ MGP_PWKPhJ_G0014982
 protein coding gene Chr1:11505915-11508668 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014763
 protein coding gene Chr1:12201319-12204000 (-)
WSB/EiJ MGP_WSBEiJ_G0015262
 protein coding gene Chr1:11962528-11965172 (-)



Homology
more
  • Human Ortholog
    MSC, musculin
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MSC, musculin
  • Synonyms
    ABF1, ABF-1, bHLHa22, MYOR
  • Links
    NCBI Gene ID: 9242
    neXtProt AC: NX_O60682
    UniProt: O60682

  • Chr Location
    8q13.3; chr8:71841560-71844412 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    12 phenotypes from multigenic genotypes
    8 phenotype references
Mice homozygous for a targeted mutation are obtained at predicted Mendelian ratios and exhibit no obvious phenotypic abnormalities.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    18
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    851
  • Tissues
    74
  • cDNA Data
    22
  • Literature Summary
    20
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 17681 NCBI Gene Model | MGI Sequence Detail 2647 C57BL/6J ±  kb
transcript NM_001411712 RefSeq | MGI Sequence Detail 1891 ZRU/MplStud  
polypeptide O88940 UniProt | EBI | MGI Sequence Detail 201 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 31
    Genomic 2
    cDNA 24
    Primer pair 2
    Other 3

    Microarray probesets 4
References
more
  • Summaries
    All 49
    Developmental Gene Expression 20
    Gene Ontology 8
    Phenotypes 8
  • Earliest
    J:50698 Robb L, et al., musculin: a murine basic helix-loop-helix transcription factor gene expressed in embryonic skeletal muscle. Mech Dev. 1998 Aug;76(1-2):197-201
  • Latest
    J:299546 Yahya I, et al., Cxcr4 and Sdf-1 are critically involved in the formation of facial and non-somitic neck muscles. Sci Rep. 2020 Mar 19;10(1):5049
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory