Krtap20-1 MGI Mouse Gene Detail - MGI:1330279 - keratin associated protein 20-1

Sequence Map

Chr16:88880912-88881422 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1330279	protein coding gene	Chr16:88880903-88881422 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0023011	protein coding gene	Chr16:89926265-89926784 (+)
A/J	MGP_AJ_G0022979	protein coding gene	Chr16:85749283-85749802 (+)
AKR/J	MGP_AKRJ_G0022949	protein coding gene	Chr16:88369161-88369680 (+)
BALB/cJ	MGP_BALBcJ_G0022981	protein coding gene	Chr16:86279680-86280199 (+)
C3H/HeJ	MGP_C3HHeJ_G0022742	protein coding gene	Chr16:88921360-88921879 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0023428	protein coding gene	Chr16:92815581-92816100 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0022262	protein coding gene	Chr16:89375557-89376064 (+)
CBA/J	MGP_CBAJ_G0022711	protein coding gene	Chr16:96769808-96770327 (+)
DBA/2J	MGP_DBA2J_G0022845	protein coding gene	Chr16:85679497-85680016 (+)
FVB/NJ	MGP_FVBNJ_G0022820	protein coding gene	Chr16:84773816-84774722 (+)
LP/J	MGP_LPJ_G0022915	protein coding gene	Chr16:89628748-89629267 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0022840	protein coding gene	Chr16:101376836-101377355 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0023446	protein coding gene	Chr16:88855516-88856035 (+)
PWK/PhJ	MGP_PWKPhJ_G0022006	protein coding gene	Chr16:85826401-85826908 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0021838	protein coding gene	Chr16:88410192-88410699 (+)
WSB/EiJ	MGP_WSBEiJ_G0022313	protein coding gene	Chr16:89092202-89092721 (+)

Vertebrate Orthology Source

Alliance of Genome Resources

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	100040249	NCBI Gene Model \| MGI Sequence Detail	511	C57BL/6J	± kb
transcript	NM_010674	RefSeq \| MGI Sequence Detail	511	C57BL/6
polypeptide	NP_034804	RefSeq \| MGI Sequence Detail	57	C57BL/6

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Summaries

All 19

Phenotypes 6
Earliest

J:44334 Aoki N, et al., Isolation and characterization of mouse high-glycine/tyrosine proteins. J Biol Chem. 1997 Nov 28;272(48):30512-8
Latest

J:335294 Redhead Y, et al., Craniofacial dysmorphology in Down syndrome is caused by increased dosage of Dyrk1a and at least three other genes. Development. 2023 Apr 15;150(8):dev201077

TSS for Krtap20-1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr139250	Chr16:88880909-88880913 (+)	-1 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/09/2024 MGI 6.23