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Macir Gene Detail
Summary
  • Symbol
    Macir
  • Name
    macrophage immunometabolism regulator
  • Synonyms
    D1Ertd622e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1277184
    NCBI Gene: 52392
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:97571627-97589743 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 47.76 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    171 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1277184
 protein coding gene Chr1:97534043-97589799 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016358
 protein coding gene Chr1:99416506-99434677 (-)
A/J MGP_AJ_G0016342
 protein coding gene Chr1:95896501-95953155 (-)
AKR/J MGP_AKRJ_G0028525
 protein coding gene Chr4:114823165-114823662 (+)
BALB/cJ MGP_BALBcJ_G0016298
 protein coding gene Chr1:96046466-96105542 (-)
C3H/HeJ MGP_C3HHeJ_G0016125
 protein coding gene Chr1:98975263-99031422 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016757
 protein coding gene Chr1:103313860-103372567 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014475
 protein coding gene Chr1:90212000-90229906 (-)
CAST/EiJ MGP_CASTEiJ_G0015707
 protein coding gene Chr1:98072361-98135364 (-)
CBA/J MGP_CBAJ_G0016098
 protein coding gene Chr1:106739646-106758088 (-)
DBA/2J MGP_DBA2J_G0016203
 protein coding gene Chr1:95103112-95160123 (-)
FVB/NJ MGP_FVBNJ_G0016204
 protein coding gene Chr1:94096220-94152866 (-)
LP/J MGP_LPJ_G0016277
 protein coding gene Chr1:100661344-100723061 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016230
 protein coding gene Chr1:110401063-110464611 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016796
 protein coding gene Chr1:98672933-98736910 (-)
PWK/PhJ MGP_PWKPhJ_G0015495
 protein coding gene Chr1:94285051-94342277 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015279
 protein coding gene Chr1:97520231-97578123 (-)
WSB/EiJ MGP_WSBEiJ_G0015770
 protein coding gene Chr1:98515300-98575625 (-)



Homology
more
  • Human Ortholog
    MACIR, macrophage immunometabolism regulator
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MACIR, macrophage immunometabolism regulator
  • Synonyms
    C5orf30
  • Links
    NCBI Gene ID: 90355
    neXtProt AC: NX_Q96GV9
    UniProt: Q96GV9

  • Chr Location
    5q21.1; chr5:103258374-103278660 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    17
  • GO References
    5
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    760
  • Tissues
    46
  • cDNA Data
    52
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 52392 NCBI Gene Model | MGI Sequence Detail 18117 C57BL/6J ±  kb
    transcript NM_001355072 RefSeq | MGI Sequence Detail 3496 ZRU/MplStud  
    polypeptide Q8VEB3 UniProt | EBI | MGI Sequence Detail 207 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 54
      cDNA 52
      Primer pair 2

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:2138377, MGI:2138546
    References
    more
    • Summaries
      All 39
      Developmental Gene Expression 2
      Gene Ontology 5
      Phenotypes 12
    • Earliest
      J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
    • Latest
      J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/09/2024
    MGI 6.23     		The Jackson Laboratory