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Slc25a39 Gene Detail
Summary
  • Symbol
    Slc25a39
  • Name
    solute carrier family 25, member 39
  • Synonyms
    3010027G13Rik, D11Ertd333e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1196386
    NCBI Gene: 68066
  • Alliance
    genome feature page
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:102293811-102298772 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 66.29 cM, cytoband D
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    194 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1196386
 protein coding gene Chr11:102293795-102299501 (-)
129S1/SvImJ ENSMUSG00200049974
 protein coding gene Chr11:99580132-99583963 (-)
A/J ENSMUSG00195049638
 protein coding gene Chr11:99285495-99289323 (-)
AKR/J ENSMUSG00220049523
 protein coding gene Chr11:99495546-99499377 (-)
BALB/cJ ENSMUSG00180050247
 protein coding gene Chr11:99627791-99631622 (-)
C3H/HeJ ENSMUSG00175051339
 protein coding gene Chr11:99553664-99557495 (-)
C57BL/6NJ ENSMUSG00215050663
 protein coding gene Chr11:99115700-99119531 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017251
 protein coding gene Chr11:98357535-98362551 (-)
CAST/EiJ ENSTCUG00005047316
 protein coding gene Chr11:99054620-99058452 (-)
CBA/J ENSMUSG00210052826
 protein coding gene Chr11:99261496-99265327 (-)
DBA/2J ENSMUSG00185050127
 protein coding gene Chr11:99603519-99607350 (-)
FVB/NJ ENSMUSG00205045982
 protein coding gene Chr11:99446419-99450252 (-)
JF1/MsJ ENSUMUG00000055009
 protein coding gene Chr11:99866120-99869951 (-)
LP/J ENSMUSG00230049297
 protein coding gene Chr11:100656054-100659885 (-)
NOD/ShiLtJ ENSMUSG00190042116
 protein coding gene Chr11:99642059-99645890 (-)
NZO/HlLtJ ENSMUSG00225049672
 protein coding gene Chr11:102678717-102682548 (-)
PWK/PhJ ENSLUMG00010046201
 protein coding gene Chr11:99399960-99403791 (-)
SPRET/EiJ ENSMSPG00010050025
 protein coding gene Chr11:99892471-99902233 (-)
WSB/EiJ ENSIUOG00005046702
 protein coding gene Chr11:99397124-99400943 (-)



Homology
more
  • Human Ortholog
    SLC25A39, solute carrier family 25 member 39
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLC25A39, solute carrier family 25 member 39
  • Synonyms
    CGI-69, CGI69
  • Links
    NCBI Gene ID: 51629
    UniProt: Q9BZJ4

  • Chr Location
    17q21.31; chr17:44319625-44325801 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    19 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    18
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    814
  • Tissues
    48
  • cDNA Data
    18
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000018677 Ensembl Gene Model | MGI Sequence Detail 4962 C57BL/6J ±  kb
    transcript ENSMUST00000018821 Ensembl | MGI Sequence Detail 1685 Not Applicable  
    polypeptide ENSMUSP00000018821 Ensembl | MGI Sequence Detail 359 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      11 Sequences
    • Protein Ontology
      PR:000032515 mitochondrial glutathione transporter SLC25A39
      (term hierarchy)
    • InterPro Domains
      IPR023395 Mitochondrial carrier protein domain superfamily
      IPR045315 Mitochondrial carrier protein Mtm1-like
      IPR018108 Mitochondrial carrier protein, transmembrane region
    • GlyGen
      Q9D8K8 2 sites
    Molecular
    Reagents
    less
    • All nucleic 20
      cDNA 18
      Primer pair 2

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:1915316
    References
    more
    • Summaries
      All 52
      Developmental Gene Expression 3
      Gene Ontology 8
      Phenotypes 19
    • Earliest
      J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory