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Rbm34 Gene Detail
Summary
  • Symbol
    Rbm34
  • Name
    RNA binding motif protein 34
  • Synonyms
    4930547K05Rik, D8Ertd233e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1098653
    NCBI Gene: 52202
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:127673922-127697799 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 74.64 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    36 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1098653
 protein coding gene Chr8:127673922-127697821 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034298
 protein coding gene Chr8:130808847-130832737 (-)
A/J MGP_AJ_G0034277
 protein coding gene Chr8:125382664-125406704 (-)
AKR/J MGP_AKRJ_G0034204
 protein coding gene Chr8:128990174-129013958 (-)
BALB/cJ MGP_BALBcJ_G0034270
 protein coding gene Chr8:125559180-125583044 (-)
C3H/HeJ MGP_C3HHeJ_G0033981
 protein coding gene Chr8:129633999-129659279 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034790
 protein coding gene Chr8:135120362-135147545 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031732
 protein coding gene Chr8:118061750-118086335 (-)
CAST/EiJ MGP_CASTEiJ_G0033308
 protein coding gene Chr8:129819908-129846803 (-)
CBA/J MGP_CBAJ_G0033955
 protein coding gene Chr8:140153334-140182930 (-)
DBA/2J MGP_DBA2J_G0034110
 protein coding gene Chr8:124498943-124523402 (-)
FVB/NJ MGP_FVBNJ_G0034055
 protein coding gene Chr8:123729213-123753116 (-)
LP/J MGP_LPJ_G0034199
 protein coding gene Chr8:130981916-131005766 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034101
 protein coding gene Chr8:142047693-142074347 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034809
 protein coding gene Chr8:129221270-129247074 (-)
PWK/PhJ MGP_PWKPhJ_G0033011
 protein coding gene Chr8:124294890-124319270 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032849
 protein coding gene Chr8:127867028-127895834 (-)
WSB/EiJ MGP_WSBEiJ_G0033426
 protein coding gene Chr8:129969781-129995274 (-)



Homology
more
  • Human Ortholog
    RBM34, RNA binding motif protein 34
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RBM34, RNA binding motif protein 34
  • Links
    NCBI Gene ID: 23029
    neXtProt AC: NX_P42696
    UniProt: P42696

  • Chr Location
    1q42.3; chr1:235131183-235161283 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    776
  • Tissues
    52
  • cDNA Data
    15
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 52202 NCBI Gene Model | MGI Sequence Detail 23878 C57BL/6J ±  kb
transcript NM_172762 RefSeq | MGI Sequence Detail 3402 Not Specified  
polypeptide Q8C5L7 UniProt | EBI | MGI Sequence Detail 442 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 19
    cDNA 16
    Primer pair 3

    Microarray probesets 5
Other
Accession IDs
less
MGI:1914899
References
more
  • Summaries
    All 33
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:228563 Koscielny G, et al., The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Nucleic Acids Res. 2014 Jan;42(Database issue):D802-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory