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Ccr4 Gene Detail
Summary
  • Symbol
    Ccr4
  • Name
    C-C motif chemokine receptor 4
  • Synonyms
    CC CKR-4, Cmkbr4
Location &
Maps
more
  • Sequence Map
    Chr9:114319384-114333984 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 64.49 cM
  • Mapping Data
    5 experiments
Strain
Comparison
more
  • SNPs within 2kb
    555 from dbSNP Build 142
  • Strain Annotations
    19
  • RFLP
    2
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_107824
 protein coding gene Chr9:114319384-114334544 (-)
129S1/SvImJ ENSMUSG00200028548
 protein coding gene Chr9:111421954-111436553 (-)
A/J ENSMUSG00195032374
 protein coding gene Chr9:110621494-110635705 (-)
AKR/J ENSMUSG00220021800
 protein coding gene Chr9:111084169-111098770 (-)
BALB/cJ ENSMUSG00180025426
 protein coding gene Chr9:111159189-111173404 (-)
C3H/HeJ ENSMUSG00175016639
 protein coding gene Chr9:111380248-111394455 (-)
C57BL/6NJ ENSMUSG00215036489
 protein coding gene Chr9:111264368-111278969 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032770
 protein coding gene Chr9:109948002-109953604 (-)
CAST/EiJ ENSTCUG00005028025
 protein coding gene Chr9:111039925-111054285 (-)
CBA/J ENSMUSG00210028937
 protein coding gene Chr9:111106810-111121404 (-)
DBA/2J ENSMUSG00185014284
 protein coding gene Chr9:111443557-111458151 (-)
FVB/NJ ENSMUSG00205045224
 protein coding gene Chr9:111281910-111296119 (-)
JF1/MsJ ENSUMUG00000047589
 protein coding gene Chr9:111268561-111282547 (-)
LP/J ENSMUSG00230049037
 protein coding gene Chr9:111550720-111565314 (-)
NOD/ShiLtJ ENSMUSG00190047735
 protein coding gene Chr9:111036692-111051291 (-)
NZO/HlLtJ ENSMUSG00225024084
 protein coding gene Chr9:111832264-111846861 (-)
PWK/PhJ ENSLUMG00010029552
 protein coding gene Chr9:111220016-111232481 (-)
SPRET/EiJ ENSMSPG00010019790
 protein coding gene Chr9:112880117-112893108 (-)
WSB/EiJ ENSIUOG00005044951
 protein coding gene Chr9:110496746-110510991 (-)



Homology
more
  • Human Ortholog
    CCR4, C-C motif chemokine receptor 4
  • Vertebrate Orthologs
    5
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCR4, C-C motif chemokine receptor 4
  • Synonyms
    CC-CKR-4, CD194, ChemR13, CKR4, CMKBR4, HGCN:14099, K5-5
  • Links
    NCBI Gene ID: 1233
    UniProt: P51679

  • Chr Location
    3p22.3; chr3:32951644-32957120 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    30 phenotypes from 1 allele in 2 genetic backgrounds
    58 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygous mutation of this gene results in decreased mortality, decreased tumor necrosis factor production, and decreased IL-1beta production following LPS administration.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    33
  • GO References
    13
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    755
  • Tissues
    88
  • cDNA Data
    14
  • Literature Summary
    8
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000047898 Ensembl Gene Model | MGI Sequence Detail 14601 C57BL/6J ±  kb
    transcript ENSMUST00000054414 Ensembl | MGI Sequence Detail 2805 Not Applicable  
    polypeptide ENSMUSP00000062677 Ensembl | MGI Sequence Detail 360 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 19
      cDNA 15
      Primer pair 1
      Other 3
      Antibodies 1

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGD-MRK-36401, MGD-MRK-37445
    References
    more
    • Summaries
      All 160
      Developmental Gene Expression 8
      Gene Ontology 13
      Phenotypes 58
    • Earliest
      J:30657 Hoogewerf A, et al., Molecular cloning of murine CC CKR-4 and high affinity binding of chemokines to murine and human CC CKR-4. Biochem Biophys Res Commun. 1996 Jan 5;218(1):337-43
    • Latest
      J:372439 Tanaka T, et al., C-C chemokine receptor 4 deficiency exacerbates early atherosclerosis in mice. Elife. 2025 Jul 3;13
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory