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Calm2 Gene Detail
Summary
  • Symbol
    Calm2
  • Name
    calmodulin 2
  • Synonyms
    1500001E21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:103250
    NCBI Gene: 12314
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:87740840-87754363 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 17, 57.49 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_103250
protein coding gene Chr17:87740829-87754363 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024103
protein coding gene Chr17:90826406-90840562 (-)
A/J MGP_AJ_G0024062
protein coding gene Chr17:87900144-87921622 (-)
AKR/J MGP_AKRJ_G0024031
protein coding gene Chr17:89375956-89388847 (-)
BALB/cJ MGP_BALBcJ_G0024063
protein coding gene Chr17:87751005-87764075 (-)
C3H/HeJ MGP_C3HHeJ_G0023828
protein coding gene Chr17:90252005-90265344 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024508
protein coding gene Chr17:93952518-93970261 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021947
protein coding gene Chr17:83038733-83051143 (-)
CAST/EiJ MGP_CASTEiJ_G0023307
protein coding gene Chr17:91082142-91098114 (-)
CBA/J MGP_CBAJ_G0023802
protein coding gene Chr17:97904033-97918996 (-)
DBA/2J MGP_DBA2J_G0023930
protein coding gene Chr17:86330113-86343835 (-)
FVB/NJ MGP_FVBNJ_G0023896
protein coding gene Chr17:85847079-85861071 (-)
LP/J MGP_LPJ_G0024014
protein coding gene Chr17:91618687-91631443 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023924
protein coding gene Chr17:97772512-97793565 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024553
protein coding gene Chr17:89894993-89910004 (-)
PWK/PhJ MGP_PWKPhJ_G0023052
protein coding gene Chr17:85972943-85993840 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022863
protein coding gene Chr17:86635160-86652318 (-)
WSB/EiJ MGP_WSBEiJ_G0023373
protein coding gene Chr17:90740462-90753310 (-)



Homology
more
  • Human Ortholog
    CALM2, calmodulin 2
  • Vertebrate Orthologs
    10
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CALM2, calmodulin 2
  • Synonyms
    CALM, CALML2, caM, CAM1, CAM3, CAMC, CAMII, CAMIII, LQT15, PHKD, PHKD2
  • Links
    NCBI Gene ID: 805
    neXtProt AC: NX_P0DP23, NX_P0DP24, NX_P0DP25
    UniProt: P0DP24

  • Chr Location
    2p21; chr2:47160082-47176936 (-)  GRCh38

Human Diseases
more
  • Diseases
    1 with human CALM2 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000036438 Ensembl Gene Model | MGI Sequence Detail 13524 C57BL/6J ±  kb
transcript ENSMUST00000040440 Ensembl | MGI Sequence Detail 1205 Not Applicable  
polypeptide ENSMUSP00000048857 Ensembl | MGI Sequence Detail 149 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 735
    cDNA 733
    Primer pair 1
    Other 1

    Microarray probesets 5
Other
Accession IDs
less
MGD-MRK-24126, MGI:1922950, MGI:2146954
References
more
  • Summaries
    All 50
    Developmental Gene Expression 11
    Gene Ontology 7
    Phenotypes 7
  • Earliest
    J:19936 Bender PK, et al., The abundance of calmodulin mRNAs is regulated in phosphorylase kinase-deficient skeletal muscle. J Biol Chem. 1988 Jul 15;263(20):9733-7
  • Latest
    J:338811 Qu F, et al., Three-dimensional molecular architecture of mouse organogenesis. Nat Commun. 2023 Jul 31;14(1):4599

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/12/2024
MGI 6.23
The Jackson Laboratory