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Eif3s6-ps1 Pseudogene Detail
Summary
  • Symbol
    Eif3s6-ps1
  • Name
    eukaryotic translation initiation factor 3, subunit 6, pseudogene 1
  • Synonyms
    Int6-ps1
  • Feature Type
    pseudogene
  • IDs
    MGI:103203
    NCBI Gene: 16342
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr11:9687152-9687621 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 6.13 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    39 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_103203
 pseudogene Chr11:9687011-9687621 (-)
129S1/SvImJ MGP_129S1SvImJ_G0010583
 pseudogene Chr11:6993159-6993628 (-)
A/J MGP_AJ_G0011462
 pseudogene Chr18:87584588-87585049 (-)
AKR/J MGP_AKRJ_G0011426
 pseudogene Chr18:90197383-90197844 (-)
BALB/cJ MGP_BALBcJ_G0011442
 pseudogene Chr18:87882721-87883182 (-)
C3H/HeJ MGP_C3HHeJ_G0011325
 pseudogene Chr18:90432511-90432972 (-)
C57BL/6NJ MGP_C57BL6NJ_G0010821
 pseudogene Chr11:7207836-7208305 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0010155
 pseudogene Chr17:11443178-11443637 (+)
CAST/EiJ MGP_CASTEiJ_G0011002
 pseudogene Chr17:13521779-13522244 (+)
CBA/J MGP_CBAJ_G0010445
 pseudogene Chr11:7777967-7778399 (-)
DBA/2J MGP_DBA2J_G0010475
 pseudogene Chr11:6659019-6662654 (-)
FVB/NJ MGP_FVBNJ_G0010492
 pseudogene Chr11:6603839-6604308 (-)
LP/J MGP_LPJ_G0011423
 pseudogene Chr18:91596699-91597160 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0011354
 pseudogene Chr18:99430732-99431193 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0010798
 pseudogene Chr11:7076593-7077062 (-)
PWK/PhJ MGP_PWKPhJ_G0010872
 pseudogene Chr17:12656614-12657079 (+)
SPRET/EiJ MGP_SPRETEiJ_G0010699
 pseudogene Chr17:12607633-12608094 (+)
WSB/EiJ MGP_WSBEiJ_G0011158
 pseudogene Chr18:90422706-90423167 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000081629 Ensembl Gene Model | MGI Sequence Detail 470 C57BL/6J ±  kb
transcript ENSMUST00000117907 Ensembl | MGI Sequence Detail 470 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 1
    cDNA 1
Other
Accession IDs
less
MGD-MRK-24071, MGI:3650900
References
more
  • Summaries
    All 8
  • Earliest
    J:27401 Miyazaki S, et al., The chromosomal location of the mouse mammary tumor gene Int6 and related pseudogenes in the mouse genome. Genomics. 1995 Jun 10;27(3):420-4
  • Latest
    J:62456 Lyu MS, et al., Genetic mapping of six mouse peroxiredoxin genes and fourteen peroxiredoxin related sequences. Mamm Genome. 1999 Oct;10(10):1017-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory