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Pou2f3-rs1 Pseudogene Detail
Summary
  • Symbol
    Pou2f3-rs1
  • Name
    POU domain, class 2, transcription factor 3, related sequence 1
  • Synonyms
    Otf11-rs1
  • Feature Type
    pseudogene
  • IDs
    MGI:103144
    NCBI Gene: 671141
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr1:106815582-106816627 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 50.34 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    7 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_103144
 pseudogene Chr1:106814444-106816627 (-)
129S1/SvImJ MGP_129S1SvImJ_G0010278
 pseudogene Chr1:109075794-109076818 (-)
A/J MGP_AJ_G0010272
 pseudogene Chr1:105244180-105245207 (-)
AKR/J MGP_AKRJ_G0010242
 pseudogene Chr1:108125338-108126380 (-)
BALB/cJ MGP_BALBcJ_G0010246
 pseudogene Chr1:105339586-105341568 (-)
C3H/HeJ MGP_C3HHeJ_G0010185
 pseudogene Chr1:108579631-108580649 (-)
C57BL/6NJ MGP_C57BL6NJ_G0010519
 pseudogene Chr1:113218839-113220445 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0009225
 pseudogene Chr1:99542986-99545174 (-)
CAST/EiJ MGP_CASTEiJ_G0010008
 pseudogene Chr1:107490836-107494686 (-)
CBA/J MGP_CBAJ_G0010154
 pseudogene Chr1:117086649-117090430 (-)
DBA/2J MGP_DBA2J_G0010186
 pseudogene Chr1:104313509-104314823 (-)
FVB/NJ MGP_FVBNJ_G0010205
 pseudogene Chr1:103247155-103248764 (-)
LP/J MGP_LPJ_G0010265
 pseudogene Chr1:110309267-110310842 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0010164
 pseudogene Chr1:121496915-121497939 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0010484
 pseudogene Chr1:108214545-108215566 (-)
PWK/PhJ MGP_PWKPhJ_G0009911
 pseudogene Chr1:103335402-103336802 (-)
SPRET/EiJ MGP_SPRETEiJ_G0009729
 pseudogene Chr1:106864966-106865991 (-)
WSB/EiJ MGP_WSBEiJ_G0010072
 pseudogene Chr1:108037553-108039877 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Pou2f3-rs1
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000083613 Ensembl Gene Model | MGI Sequence Detail 1046 C57BL/6J ±  kb
transcript ENSMUST00000120271 Ensembl | MGI Sequence Detail 1046 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 1
    cDNA 1
Other
Accession IDs
less
MGD-MRK-13068, MGD-MRK-24010, MGI:3643191
References
more
  • Summaries
    All 10
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:4013 Goldsborough AS, et al., Cloning, chromosomal localization and expression pattern of the POU domain gene Oct-11. Nucleic Acids Res. 1993 Jan 11;21(1):127-34
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory