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Fabp6 Gene Detail
Summary
  • Symbol
    Fabp6
  • Name
    fatty acid binding protein 6
  • Synonyms
    gastrotropin, I-15P, I-BABP, ILBP3, Illbp
  • Feature Type
    protein coding gene
  • IDs
    MGI:96565
    NCBI Gene: 16204
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:43486876-43492367 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 25.81 cM
  • Mapping Data
    5 experiments
Strain
Comparison
more
  • SNPs within 2kb
    16 from dbSNP Build 142
  • Strain Annotations
    17
  • RFLP
    2
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_96565
 protein coding gene Chr11:43486867-43492389 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018176
 protein coding gene Chr11:42372572-42381698 (-)
A/J MGP_AJ_G0018148
 protein coding gene Chr11:40758619-40764940 (-)
AKR/J MGP_AKRJ_G0018112
 protein coding gene Chr11:41952939-41958190 (-)
BALB/cJ MGP_BALBcJ_G0018117
 protein coding gene Chr11:40931003-40936488 (-)
C3H/HeJ MGP_C3HHeJ_G0017930
 protein coding gene Chr11:41980136-41985596 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018571
 protein coding gene Chr11:43661181-43666647 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016226
 protein coding gene Chr11:38814155-38820171 (-)
CAST/EiJ MGP_CASTEiJ_G0017494
 protein coding gene Chr11:42031016-42040102 (-)
CBA/J MGP_CBAJ_G0017903
 protein coding gene Chr11:45688103-45693590 (-)
DBA/2J MGP_DBA2J_G0018013
 protein coding gene Chr11:40535072-40540555 (-)
FVB/NJ MGP_FVBNJ_G0018007
 protein coding gene Chr11:40221134-40227703 (-)
LP/J MGP_LPJ_G0018085
 protein coding gene Chr11:42616629-42622087 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018031
 protein coding gene Chr11:47331630-47338100 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018610
 protein coding gene Chr11:42106582-42113781 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0017067
 protein coding gene Chr11:41899569-41906967 (-)
WSB/EiJ MGP_WSBEiJ_G0017543
 protein coding gene Chr11:41747506-41756789 (-)



Homology
more
  • Human Ortholog
    FABP6, fatty acid binding protein 6
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FABP6, fatty acid binding protein 6
  • Synonyms
    I-15P, I-BABP, I-BALB, I-BAP, ILBP, ILBP3, ILLBP
  • Links
    NCBI Gene ID: 2172
    neXtProt AC: NX_P51161
    UniProt: P51161

  • Chr Location
    5q33.3; chr5:160187367-160238735 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit sex-specific altered bile acid absorption and transport.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    800
  • Tissues
    46
  • cDNA Data
    5
  • Literature Summary
    8
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000020405 Ensembl Gene Model | MGI Sequence Detail 5492 C57BL/6J ±  kb
    transcript ENSMUST00000020672 Ensembl | MGI Sequence Detail 479 Not Applicable  
    polypeptide ENSMUSP00000020672 Ensembl | MGI Sequence Detail 128 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 10
      Genomic 3
      cDNA 5
      Primer pair 2

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGD-MRK-11399
    References
    more
    • Summaries
      All 46
      Developmental Gene Expression 8
      Gene Ontology 4
      Phenotypes 10
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:331835 Salazar-Petres E, et al., Placental structure, function, and mitochondrial phenotype relate to fetal size in each fetal sex in mice. Biol Reprod. 2022 Jun 13;106(6):1292-1311
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/09/2024
    MGI 6.23     		The Jackson Laboratory