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Car1 Gene Detail
Summary
  • Symbol
    Car1
  • Name
    carbonic anhydrase 1
  • Synonyms
    CA I, Car-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:88268
    NCBI Gene: 12346
  • Alliance
    gene page
  • Transcription Start Sites
    15 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:14831274-14873425 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 3.18 cM
  • Mapping Data
    13 experiments
Strain
Comparison
more
  • SNPs within 2kb
    370 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_88268
 protein coding gene Chr3:14831274-14873428 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027077
 protein coding gene Chr3:11893957-11951623 (-)
A/J MGP_AJ_G0027041
 protein coding gene Chr3:11865985-11909572 (-)
AKR/J MGP_AKRJ_G0027011
 protein coding gene Chr3:11844690-11902669 (-)
BALB/cJ MGP_BALBcJ_G0027050
 protein coding gene Chr3:11628671-11680678 (-)
C3H/HeJ MGP_C3HHeJ_G0026790
 protein coding gene Chr3:12174855-12225264 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027494
 protein coding gene Chr3:12696474-12755539 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0026248
 protein coding gene Chr3:12189862-12217356 (-)
CBA/J MGP_CBAJ_G0026768
 protein coding gene Chr3:12907304-12973715 (-)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0026871
 protein coding gene Chr3:11262737-11312042 (-)
LP/J MGP_LPJ_G0027014
 protein coding gene Chr3:12485229-12554329 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026892
 protein coding gene Chr3:14669547-14696002 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027554
 protein coding gene Chr3:11664406-11711214 (-)
PWK/PhJ MGP_PWKPhJ_G0025983
 protein coding gene Chr3:11532297-11586512 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0026319
 protein coding gene Chr3:11729390-11789226 (-)



Homology
more
  • Human Ortholog
    CA1, carbonic anhydrase 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CA1, carbonic anhydrase 1
  • Synonyms
    CAB, CA-I, Car1, HEL-S-11
  • Links
    NCBI Gene ID: 759
    neXtProt AC: NX_P00915
    UniProt: P00915

  • Chr Location
    8q21.2; chr8:85327608-85379014 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
This locus controls electrophoretic variation in red blood cells. The a allele determines a slow migrating form in C57BL/6, C3H/He and other strains; the b allele determines a fast form in IS/Cam, WB/Re, SM, M. m. castaneus and M. m. molossinus.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    869
  • Tissues
    157
  • cDNA Data
    109
  • Literature Summary
    10
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 12346 NCBI Gene Model | MGI Sequence Detail 42152 C57BL/6J ±  kb
transcript NM_009799 RefSeq | MGI Sequence Detail 1196 C57BL/6  
polypeptide P13634 UniProt | EBI | MGI Sequence Detail 261 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 115
    Genomic 3
    cDNA 109
    Primer pair 3

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-1759, MGD-MRK-1762, MGI:2140006
References
more
  • Summaries
    All 61
    Developmental Gene Expression 10
    Gene Ontology 6
    Phenotypes 3
  • Earliest
    J:5671 Davisson MT, et al., Genes on chromosome 3 of the mouse. J Hered. 1976 May-Jun;67(3):155-6
  • Latest
    J:336771 Cheng K, et al., Upregulation of carbonic anhydrase 1 beneficial for depressive disorder. Acta Neuropathol Commun. 2023 Apr 3;11(1):59
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory