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Atxn7l1 Gene Detail
Summary
  • Symbol
    Atxn7l1
  • Name
    ataxin 7-like 1
  • Synonyms
    2810423G08Rik, Atxn7l4
  • Feature Type
    protein coding gene
  • IDs
    MGI:3584458
    NCBI Gene: 380753
  • Alliance
  • Transcription Start Sites
    20 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:33197692-33423184 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 12, 14.03 cM, cytoband B2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    5902 from dbSNP Build 142
  • Strain Annotations
    26
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3584458
protein coding gene Chr12:33196967-33426407 (+)
129S1/SvImJ ENSMUSGG00200054441
protein coding gene Chr12:25007098-25103574 (+)
129S1/SvImJ ENSMUSG00200015053
protein coding gene Chr12:25167061-25225132 (+)
A/J ENSMUSGG00195055375
protein coding gene Chr12:27694801-27791198 (+)
A/J ENSMUSG00195021020
protein coding gene Chr12:27854844-27912871 (+)
AKR/J ENSMUSGG00220054615
protein coding gene Chr12:25663219-25759633 (+)
AKR/J ENSMUSG00220028206
protein coding gene Chr12:25823278-25881302 (+)
BALB/cJ ENSMUSGG00180055477
protein coding gene Chr12:26693846-26790254 (+)
BALB/cJ ENSMUSG00180025521
protein coding gene Chr12:26853891-26911912 (+)
C3H/HeJ ENSMUSG00175021228
protein coding gene Chr12:29887195-29945215 (+)
C3H/HeJ ENSMUSGG00175054848
protein coding gene Chr12:29727159-29823560 (+)
C57BL/6NJ ENSMUSG00215011836
protein coding gene Chr12:26291667-26349737 (+)
C57BL/6NJ ENSMUSGG00215055573
protein coding gene Chr12:26124583-26228059 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017690
protein coding gene Chr12:29562973-29784506 (+)
CAST/EiJ no annotation
CBA/J ENSMUSG00210008287
protein coding gene Chr12:26376440-26434464 (+)
CBA/J ENSMUSGG00210054867
protein coding gene Chr12:26216394-26312807 (+)
DBA/2J ENSMUSG00185014509
protein coding gene Chr12:28404793-28462866 (+)
DBA/2J ENSMUSGG00185057806
protein coding gene Chr12:28237704-28341184 (+)
FVB/NJ ENSMUSG00205006078
protein coding gene Chr12:26434328-26492401 (+)
FVB/NJ ENSMUSGG00205054290
protein coding gene Chr12:26267230-26370722 (+)
JF1/MsJ no annotation
LP/J ENSMUSGG00230055825
protein coding gene Chr12:35197704-35301174 (+)
LP/J ENSMUSG00230021790
protein coding gene Chr12:35364783-35422855 (+)
NOD/ShiLtJ ENSMUSG00190018261
protein coding gene Chr12:25341455-25399533 (+)
NOD/ShiLtJ ENSMUSGG00190054820
protein coding gene Chr12:25174349-25277829 (+)
NZO/HlLtJ ENSMUSG00225030600
protein coding gene Chr12:37564221-37606785 (+)
NZO/HlLtJ ENSMUSGG00225055488
protein coding gene Chr12:37392285-37489454 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    ATXN7L1, ataxin 7 like 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ATXN7L1, ataxin 7 like 1
  • Synonyms
    ATXN7L4
  • Links
    NCBI Gene ID: 222255
    UniProt: Q9ULK2

  • Chr Location
    7q22.3; chr7:105604772-105876599 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Comparison Matrix
  • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000020564 Ensembl Gene Model | MGI Sequence Detail 225493 C57BL/6J ±  kb
    transcript ENSMUST00000146040 Ensembl | MGI Sequence Detail 2973 Not Applicable  
    polypeptide ENSMUSP00000122156 Ensembl | MGI Sequence Detail 927 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 13
      Genomic 1
      cDNA 12

      Microarray probesets 6
    Other
    Accession IDs
    less
    MGI:1919424
    References
    more
    • Summaries
      All 30
      Phenotypes 8
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    last database update
    09/08/2026
    MGI 6.24
    The Jackson Laboratory