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Ccdc27 Gene Detail
Summary
  • Symbol
    Ccdc27
  • Name
    coiled-coil domain containing 27
  • Synonyms
    LOC381580
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685881
    NCBI Gene: 381580
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:154111096-154127134 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 83.79 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    528 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685881
 protein coding gene Chr4:154111096-154127202 (-)
129S1/SvImJ ENSMUSG00200018644
 protein coding gene Chr4:145172268-145188336 (-)
A/J ENSMUSG00195015358
 protein coding gene Chr4:146828858-146844920 (-)
AKR/J ENSMUSG00220024245
 protein coding gene Chr4:146415432-146431495 (-)
BALB/cJ ENSMUSG00180002246
 protein coding gene Chr4:144489890-144505971 (-)
C3H/HeJ ENSMUSG00175016993
 protein coding gene Chr4:147795775-147811837 (-)
C57BL/6NJ ENSMUSG00215008106
 protein coding gene Chr4:146626940-146643021 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026866
 protein coding gene Chr4:143931186-143946686 (-)
CAST/EiJ ENSTCUG00005032175
 protein coding gene Chr4:150491914-150507904 (-)
CBA/J ENSMUSG00210005174
 protein coding gene Chr4:146454005-146470075 (-)
DBA/2J ENSMUSG00185016433
 protein coding gene Chr4:150011229-150027293 (-)
FVB/NJ ENSMUSG00205012047
 protein coding gene Chr4:144907843-144923908 (-)
JF1/MsJ ENSUMUG00000000275
 protein coding gene Chr4:153021480-153037823 (-)
LP/J ENSMUSG00230018940
 protein coding gene Chr4:156733005-156749083 (-)
NOD/ShiLtJ ENSMUSG00190004001
 protein coding gene Chr4:146111571-146127633 (-)
NZO/HlLtJ ENSMUSG00225023972
 protein coding gene Chr4:160727422-160743508 (-)
PWK/PhJ ENSLUMG00010027186
 protein coding gene Chr4:145286133-145302296 (-)
SPRET/EiJ ENSMSPG00010018879
 protein coding gene Chr4:147241779-147258820 (-)
WSB/EiJ ENSIUOG00005006447
 protein coding gene Chr4:144320750-144336857 (-)



Homology
more
  • Human Ortholog
    CCDC27, coiled-coil domain containing 27
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC27, coiled-coil domain containing 27
  • Links
    NCBI Gene ID: 148870
    UniProt: Q2M243

  • Chr Location
    1p36.32; chr1:3746460-3771645 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039492 Ensembl Gene Model | MGI Sequence Detail 16039 C57BL/6J ±  kb
transcript ENSMUST00000047207 Ensembl | MGI Sequence Detail 2089 Not Applicable  
polypeptide ENSMUSP00000039642 Ensembl | MGI Sequence Detail 639 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 26
    Phenotypes 8
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory