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Tmed9 Gene Detail
Summary
  • Symbol
    Tmed9
  • Name
    transmembrane p24 trafficking protein 9
  • Synonyms
    2400003B06Rik, p24alpha2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914761
    NCBI Gene: 67511
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:55740948-55745510 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 30.06 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    211 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914761
 protein coding gene Chr13:55721545-55745510 (+)
129S1/SvImJ ENSMUSG00200016559
 protein coding gene Chr13:52594118-52618112 (+)
A/J ENSMUSG00195039642
 protein coding gene Chr13:52052944-52076895 (+)
AKR/J ENSMUSG00220041612
 protein coding gene Chr13:51601505-51625474 (+)
BALB/cJ ENSMUSG00180016019
 protein coding gene Chr13:52304207-52328160 (+)
C3H/HeJ ENSMUSG00175036553
 protein coding gene Chr13:52090657-52114609 (+)
C57BL/6NJ ENSMUSG00215031157
 protein coding gene Chr13:52123589-52147558 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018570
 protein coding gene Chr13:50985206-50990112 (+)
CAST/EiJ ENSTCUG00005039492
 protein coding gene Chr13:52516365-52540345 (+)
CBA/J ENSMUSG00210039100
 protein coding gene Chr13:52295477-52319429 (+)
DBA/2J ENSMUSG00185016041
 protein coding gene Chr13:53145446-53169440 (+)
FVB/NJ ENSMUSG00205029352
 protein coding gene Chr13:51948222-51972186 (+)
JF1/MsJ ENSUMUG00000020999
 protein coding gene Chr13:52538326-52562189 (+)
LP/J ENSMUSG00230032478
 protein coding gene Chr13:62487542-62513797 (+)
NOD/ShiLtJ ENSMUSG00190021278
 protein coding gene Chr13:52188371-52212371 (+)
NZO/HlLtJ ENSMUSG00225034300
 protein coding gene Chr13:56217225-56241223 (+)
PWK/PhJ ENSLUMG00010022977
 protein coding gene Chr13:51410341-51434082 (+)
SPRET/EiJ ENSMSPG00010035874
 protein coding gene Chr13:51852278-51856912 (+)
WSB/EiJ ENSIUOG00005020186
 protein coding gene Chr13:51620279-51644902 (+)



Homology
more
  • Human Ortholog
    TMED9, transmembrane p24 trafficking protein 9
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TMED9, transmembrane p24 trafficking protein 9
  • Synonyms
    GMP25, HSGP25L2G, p24a2, p24alpha2, p25
  • Links
    NCBI Gene ID: 54732
    UniProt: Q9BVK6

  • Chr Location
    5q35.3; chr5:177592195-177597242 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
  • All Mutations and Alleles
    20
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    4
  • Gene trapped
    13
  • Targeted
    2
  • Genomic Mutations
    2 involving Tmed9
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    13 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    27
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    602
  • Tissues
    1
  • cDNA Data
    134
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67511 NCBI Gene Model | MGI Sequence Detail 4563 C57BL/6J ±  kb
transcript NM_026211 RefSeq | MGI Sequence Detail 1463 C57BL/6  
polypeptide Q99KF1 UniProt | EBI | MGI Sequence Detail 235 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 135
    cDNA 134
    Primer pair 1
    Antibodies 1

    Microarray probesets 3
References
more
  • Summaries
    All 44
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 8
    Phenotypes 14
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:343815 Goga A, et al., miR-802 regulates Paneth cell function and enterocyte differentiation in the mouse small intestine. Nat Commun. 2021 Jun 7;12(1):3339
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory