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Ccdc77 Gene Detail
Summary
  • Symbol
    Ccdc77
  • Name
    coiled-coil domain containing 77
  • Synonyms
    2400002C23Rik, 2700091N06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914450
    NCBI Gene: 67200
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:120301283-120341330 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 56.95 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    66 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914450
 protein coding gene Chr6:120301283-120341335 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031202
 protein coding gene Chr6:123208482-123252754 (-)
A/J MGP_AJ_G0031171
 protein coding gene Chr6:118467659-118507423 (-)
AKR/J MGP_AKRJ_G0031102
 protein coding gene Chr6:121651520-121693525 (-)
BALB/cJ MGP_BALBcJ_G0031182
 protein coding gene Chr6:118235205-118274920 (-)
C3H/HeJ MGP_C3HHeJ_G0030527
 protein coding gene Chr6:62608978-62650790 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031640
 protein coding gene Chr6:126356614-126398223 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028800
 protein coding gene Chr6:115385098-115408799 (-)
CAST/EiJ MGP_CASTEiJ_G0030289
 protein coding gene Chr6:122061996-122135708 (-)
CBA/J MGP_CBAJ_G0030865
 protein coding gene Chr6:131367829-131418477 (-)
DBA/2J MGP_DBA2J_G0031021
 protein coding gene Chr6:117355264-117397232 (-)
FVB/NJ MGP_FVBNJ_G0030973
 protein coding gene Chr6:116478711-116517640 (-)
LP/J MGP_LPJ_G0031100
 protein coding gene Chr6:123194573-123240489 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031007
 protein coding gene Chr6:135366093-135410401 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031669
 protein coding gene Chr6:121681182-121729844 (-)
PWK/PhJ MGP_PWKPhJ_G0030004
 protein coding gene Chr6:116395153-116435895 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029833
 protein coding gene Chr6:120409393-120454869 (-)
WSB/EiJ MGP_WSBEiJ_G0030372
 protein coding gene Chr6:121977531-122020910 (-)



Homology
more
  • Human Ortholog
    CCDC77, coiled-coil domain containing 77
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC77, coiled-coil domain containing 77
  • Links
    NCBI Gene ID: 84318
    neXtProt AC: NX_Q9BR77
    UniProt: Q9BR77

  • Chr Location
    12p13.33; chr12:389273-442642 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    45
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 67200 NCBI Gene Model | MGI Sequence Detail 40048 C57BL/6J ±  kb
    transcript NM_001381934 RefSeq | MGI Sequence Detail 2803 C57BL/6  
    polypeptide Q9CZH8 UniProt | EBI | MGI Sequence Detail 489 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 45
      cDNA 45

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:1916954, MGI:2141623
    References
    more
    • Summaries
      All 35
      Gene Ontology 2
      Phenotypes 11
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:274872 Ingham NJ, et al., Mouse screen reveals multiple new genes underlying mouse and human hearing loss. PLoS Biol. 2019 Apr;17(4):e3000194
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory