early conceptus |
embryo ectoderm |
embryo endoderm |
embryo mesoderm |
embryo mesenchyme |
extraembryonic component |
alimentary system |
auditory system |
branchial arches |
cardiovascular system |
connective tissue |
endocrine system |
exocrine system |
hemolymphoid system |
integumental system |
limbs |
liver and biliary system |
musculoskeletal system |
nervous system |
olfactory system |
reproductive system |
respiratory system |
urinary system |
visual system |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Transcription Start Site | Location | Distance from Gene 5'-end |
| Tssr89014 | Chr9:42035656-42035667 (-) | -69 bp |
| Tssr89013 | Chr9:42035572-42035629 (-) | -8 bp |
| Tssr89012 | Chr9:42035564-42035571 (-) | 25 bp |
| Tssr89011 | Chr9:42035449-42035460 (-) | 138 bp |
| Tssr89010 | Chr9:42035407-42035438 (-) | 170 bp |
| Tssr2835 | Chr9:42033832-42033870 (-) | 1,742 bp |
| Tssr89009 | Chr9:42031622-42031665 (-) | 3,949 bp |
| Tssr89008 | Chr9:42009305-42009333 (-) | 26,274 bp |
| Tssr89007 | Chr9:42009276-42009279 (-) | 26,315 bp |
| Tssr89006 | Chr9:41981233-41981273 (-) | 54,340 bp |
| Tssr89005 | Chr9:41945208-41945224 (-) | 90,377 bp |
| Tssr89004 | Chr9:41933715-41933726 (-) | 101,872 bp |
| Tssr89003 | Chr9:41899535-41899565 (-) | 136,043 bp |
| Tssr89002 | Chr9:41897085-41897095 (-) | 138,503 bp |
| Tssr89001 | Chr9:41896929-41896943 (-) | 138,657 bp |
| QTL | Genetic Location* | Genome Location (GRCm39) | Reference | QTL Note |
| Ap5q | Chr9, 25.70 cM | Chr9:47053164-47053277 | J:98587 | Microarray analysis was used to identify genes showing alcohol-induced differential expression between inbred strains C57BL/6J and DBA/2J. These genes were then correlated to 6 previously identified alcohol-related QTLs to identify potential candidate genes. Two different Affymetrix microarrays were used in the analysis. Brain expression data from parental strains and 56 (DBA/2J x C57BL/6J)F2 intercross animals were used for analysis. On mouse Chromosome 9, several candidate genes were identified for Ap5q at 26 cM. The highest priority candidate genes identified for Ap5q are Sorl1, Sc5d, Spg21 (40 cM, formerly D9Wsu18e), and Arpp19. Other candidate genes with a ranking of modest priority were identified but are not listed here. |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 09/08/2026 MGI 6.24 |
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