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Ca5a Gene Detail
Summary
  • Symbol
    Ca5a
  • Name
    carbonic anhydrase 5A
  • Synonyms
    Car5, Car5a
  • Feature Type
    protein coding gene
  • IDs
    MGI:101946
    NCBI Gene: 12352
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:122642874-122671651 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 70.81 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1137 from dbSNP Build 142
  • Strain Annotations
    19
  • PCR
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_101946
 protein coding gene Chr8:122642865-122671651 (-)
129S1/SvImJ ENSMUSG00200040470
 protein coding gene Chr8:116969282-116998088 (-)
A/J ENSMUSG00195024501
 protein coding gene Chr8:117210380-117294641 (-)
AKR/J ENSMUSG00220038747
 protein coding gene Chr8:117401549-117485808 (-)
BALB/cJ ENSMUSG00180024822
 protein coding gene Chr8:117256436-117340691 (-)
C3H/HeJ ENSMUSG00175026060
 protein coding gene Chr8:117313334-117397585 (-)
C57BL/6NJ ENSMUSG00215019787
 protein coding gene Chr8:116948411-116977194 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031654
 protein coding gene Chr8:113067355-113097451 (-)
CAST/EiJ ENSTCUG00005029945
 protein coding gene Chr8:116694045-116724240 (-)
CBA/J ENSMUSG00210029533
 protein coding gene Chr8:117300950-117329731 (-)
DBA/2J ENSMUSG00185033105
 protein coding gene Chr8:123405843-123434616 (-)
FVB/NJ ENSMUSG00205025978
 protein coding gene Chr8:116262682-116291494 (-)
JF1/MsJ ENSUMUG00000011458
 protein coding gene Chr8:125694100-125724502 (-)
LP/J ENSMUSG00230024070
 protein coding gene Chr8:127020784-127049578 (-)
NOD/ShiLtJ ENSMUSG00190020377
 protein coding gene Chr8:117397041-117425844 (-)
NZO/HlLtJ ENSMUSG00225043152
 protein coding gene Chr8:130406476-130435253 (-)
PWK/PhJ ENSLUMG00010034344
 protein coding gene Chr8:117101319-117131959 (-)
SPRET/EiJ ENSMSPG00010037172
 protein coding gene Chr8:119304047-119332667 (-)
WSB/EiJ ENSIUOG00005029252
 protein coding gene Chr8:118098030-118126821 (-)



Homology
more
  • Human Ortholog
    CA5A, carbonic anhydrase 5A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CA5A, carbonic anhydrase 5A
  • Synonyms
    CA5, CA5AD, CAV, CAVA, GS1-21A4.1
  • Links
    NCBI Gene ID: 763
    UniProt: P35218

  • Chr Location
    16q24.2; chr16:87881546-87936580 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    6 phenotypes from multigenic genotypes
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit decreased body size, hyperammonemia, and increased levels of urinary metabolites.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    20
  • GO References
    14
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    749
  • Tissues
    150
  • cDNA Data
    18
  • Literature Summary
    4
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 12352 NCBI Gene Model | MGI Sequence Detail 28778 C57BL/6J ±  kb
    transcript NM_007608 RefSeq | MGI Sequence Detail 1248 C57BL/6  
    polypeptide P23589 UniProt | EBI | MGI Sequence Detail 299 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 22
      cDNA 19
      Primer pair 3

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGD-MRK-18780, MGI:8353815
    References
    more
    • Summaries
      All 44
      Developmental Gene Expression 4
      Gene Ontology 14
      Phenotypes 7
    • Earliest
      J:22511 Amor-Gueret M, et al., Nucleotide and derived amino-acid sequence of a cDNA encoding a new mouse carbonic anhydrase. Nucleic Acids Res. 1990 Mar 25;18(6):1646
    • Latest
      J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory