rs8265020 SNP Detail

Summary

• ID
  rs8265020
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:130894610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                     AAAAAACC AACAACAACA AAAAACATAA
  AACAAAAAAA TCAAGGGAAG CCCATGGAAA GGACCACNNC ACCAAGTGCT GGTCAGGGCA
  GTGATACACA CCACGGACTT CTTCCCACAG CCTGNGAGCT CTCACTACAT CTNGAGNNTA
  M
  GNATCCCATC TAGCTTCCTA NAGCCCCAGC TCCCTGTAGC CTCTCACTCT ACAAAGCCCT
  GANNNNNNNN NNGAAGCAGG AGCCATGGGG GCAGGCTCAG GAAGAGAGAC CTGAGCACCG
  AACCTACCTA TTCCATAGGG GGTCCCTCCT GCAGCACAGT CCCCNTCGAT GACAGAATGT
  TGGGAGCTGG TAGTAGCACC AGGCTAGGC                                  
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12761823	Adam33_3_JC6885_7	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8265020					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:130894610 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adam33	a disintegrin and metallopeptidase domain 33			Intron
				Noncoding-Transcript-Variant
Rr565169	regulatory region 565169			287 bp distal
Tssr26331	transcription start site region 26331			1822 bp downstream