CATCTGCCCT CATGAAGAAG AGGAAGAACA GGTTGGCAGG TGTGTACGAT TGGGCAGATT CCTTCTCCAG CTGTTCTGAC CTGAGAATCC ACTGGCTAAG ACAAGTAGCC ACACCTGAGC CATCCAGGAG GTAGAGTTTA ACTTTGCTAA GCCACCATCA CTACAGCACT GGGTTCACAC ACCATCACTC CAGCCGACAG R ACTCACTGTC CTTGAGAGAC GCTCTCTCAG AAAGGGGTAG CTGCAACTAT CATGAGCTAA AATGCATAAA TGGGACATAC AGCTTGCTAC AAGCAGGCCA TCATGACACC AGTTCATGGT GTGTCAAGAT TTTCATCCTA AATAACTGAT CTGAGCACCC ATTAGCTGGT CACAAACTTA TTGGACTTGT TTATAGAATT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | C57BL/6J |
CZECHII/EiJ |
---|---|---|---|---|---|---|---|
ss8781321 | WI_WGS_6_34651731 | WI | MOUSE | f | SNP | A | G |
SNP Consensus Information | |||||||
SNP | Consensus Type | C57BL/6J |
CZECHII/EiJ |
||||
rs6375181 | SNP | A | G |
Location: Chr6:34452225 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Bpgm | 2,3-bisphosphoglycerate mutase | 1066 bp upstream | ||||||
Cpgi17283 | CpG island 17283 | 836 bp proximal | ||||||
Rr399609 | regulatory region 399609 | 743 bp upstream | ||||||
Rr628315 | regulatory region 628315 | 1556 bp distal | ||||||
Rr628316 | regulatory region 628316 | 1052 bp distal | ||||||
Rr628317 | regulatory region 628317 | 427 bp proximal | ||||||
Rr628318 | regulatory region 628318 | 928 bp proximal | ||||||
Tssr55509 | transcription start site region 55509 | 996 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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