GTCCATCTGC CCTCATGAAG AAGAGGAAGA ACAGGTTGGC AGGTGTGTAC GATTGGGCAG ATTCCTTCTC CAGCTGTTCT GACCTGAGAA TCCACTGGCT AAGACAAGTA GCCACACCTG AGCCATCCAG GAGGTAGAGT TTAACTTTGC TAAGCCACCA TCACTACAGC ACTGGGTTCA CACACCATCA CTCCAGCCGA Y AGAACTCACT GTCCTTGAGA GACGCTCTCT CAGAAAGGGG TAGCTGCAAC TATCATGAGC TAAAATGCAT AAATGGGACA TACAGCTTGC TACAAGCAGG CCATCATGAC ACCAGTTCAT GGTGTGTCAA GATTTTCATC CTAAATAACT GATCTGAGCA CCCATTAGCT GGTCACAAAC TTATTGGACT TGTTTATAGA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | C57BL/6J |
CZECHII/EiJ |
---|---|---|---|---|---|---|---|
ss8781303 | WI_WGS_6_34651728 | WI | MOUSE | f | SNP | C | T |
SNP Consensus Information | |||||||
SNP | Consensus Type | C57BL/6J |
CZECHII/EiJ |
||||
rs6375163 | SNP | C | T |
Location: Chr6:34452222 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Bpgm | 2,3-bisphosphoglycerate mutase | 1069 bp upstream | ||||||
Cpgi17283 | CpG island 17283 | 839 bp proximal | ||||||
Rr399609 | regulatory region 399609 | 746 bp upstream | ||||||
Rr628315 | regulatory region 628315 | 1553 bp distal | ||||||
Rr628316 | regulatory region 628316 | 1049 bp distal | ||||||
Rr628317 | regulatory region 628317 | 430 bp proximal | ||||||
Rr628318 | regulatory region 628318 | 931 bp proximal | ||||||
Tssr55509 | transcription start site region 55509 | 999 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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