AGTGTTATTG AGTATTCCTA ACAAGGTCAA AGTAAATCAA ATGAGCAGGC ATCCTAAGGT TCAGAGTACC CTCAAATGTC AAATGCTGTA TGGCTGTTAG GATTGGTTTT GCATGGCTGC CGTTACCCTT CCTGAGGAGA AAGCTTTGAT ACTACAGGGC AGCGGAAATG TTTTCTGGTC CATCTGCCCT CATGAAGAAG M GGAAGAACAG GTTGGCAGGT GTGTACGATT GGGCAGATTC CTTCTCCAGC TGTTCTGACC TGAGAATCCA CTGGCTAAGA CAAGTAGCCA CACCTGAGCC ATCCAGGAGG TAGAGTTTAA CTTTGCTAAG CCACCATCAC TACAGCACTG GGTTCACACA CCATCACTCC AGCCGACAGA ACTCACTGTC CTTGAGAGAC M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | C57BL/6J |
CZECHII/EiJ |
---|---|---|---|---|---|---|---|
ss8780250 | WI_WGS_6_34651551 | WI | MOUSE | f | SNP | A | C |
SNP Consensus Information | |||||||
SNP | Consensus Type | C57BL/6J |
CZECHII/EiJ |
||||
rs6374114 | SNP | A | C |
Location: Chr6:34452045 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Bpgm | 2,3-bisphosphoglycerate mutase | 1246 bp upstream | ||||||
Cpgi17283 | CpG island 17283 | 1016 bp proximal | ||||||
Rr399609 | regulatory region 399609 | 923 bp upstream | ||||||
Rr628315 | regulatory region 628315 | 1376 bp distal | ||||||
Rr628316 | regulatory region 628316 | 872 bp distal | ||||||
Rr628317 | regulatory region 628317 | 607 bp proximal | ||||||
Rr628318 | regulatory region 628318 | 1108 bp proximal | ||||||
Tssr55509 | transcription start site region 55509 | 1176 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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