rs6360584 SNP Detail

Summary

• ID
  rs6360584
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:168012114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGGGCCAC TTTGCAGCAT
  CCTGGACGTG CCGGCTCCTG TCGACCTGGC TTTTGAGCCT TTTGTGAAAG CGGTTCCCAT
  CCGGGTGGAT TTCCTACGGC CTCAGGCAGG TGTCTGAGCT GAAAGTGAGT GCTAACTCGG
  GGCAATTTGG CTTAAGCAAA GAAATTCTGT CACTCCCCAA CAGGAAACTT CCAATATGGG
  R
  CCCGAATTGA ATTCTGAGAT CCAAAGAGTG GTACCCGGGC TCTTTCTTAC CCATGGCCCC
  ACTCTGTGTC CCTTGGGTAC GGCGGCATTC GTGGGCGGGC CCTTGGTGGT GGCACTCCTG
  CAACCTCAGG GAGAGTAACC CAGTGACAGA GAGAGGAACC CAAGGTGGTT TCTCATTGGG
  CCTGATTGGG TCATGTGCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8766679	WI_WGS_2_169167261	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6360584					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:168012114 () rs orientation: forward

Symbol	Name	Function Class
Gm52960	predicted gene, 52960	within coordinates
Gm54130	predicted gene, 54130	within coordinates
Rr570913	regulatory region 570913	1107 bp distal
Rr570914	regulatory region 570914	473 bp distal
Rr570915	regulatory region 570915	within coordinates