rs6346977 SNP Detail

Summary

• ID
  rs6346977
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:84208728 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCCCTCCC TGGCCACCTT
  CATATCTCCC TTAACAGTGC TGTTGGATTG GGGGCCAGCT TTATGCTTCC ATGATCCTCA
  GCTTCTTCCT AAAGGGACCC TGAATATAGA CCCAGTCACA CTGGGATACT AGCAGATGAA
  TTTGGGGGTG GACTTAATTC AGTCTATAAC AGCAGACAAA AAAAAAAAAA AAAAAAAAAA
  R
  GACGGGTGTG GTGGCTCAGC TGGCAGTTCC TGCTTTCGAG ATGTGAGATG TGGAAGAAGG
  AGGATCTGGA GTTCTATATA AGTAGTTGGG GCCAGCTTGA GATATATGAC AGCCTATATC
  AAAACAATAA CAACAAAAAT AAAAAGAAAA GAAAGGAAGG AAGGAGAGAA GGGGAAGGAA
  AATAGGAAGA GAGGGGAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8753030	WI_WGS_6_85128597	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6346977					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:84208728 () rs orientation: forward

Symbol	Name	Function Class
Gm44127	predicted gene, 44127	within coordinates
Rr633014	regulatory region 633014	1285 bp distal
Rr633015	regulatory region 633015	571 bp distal
Rr633016	regulatory region 633016	205 bp distal