rs6346888 SNP Detail

Summary

• ID
  rs6346888
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:84208678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTGCACAG TGGCTTTCCT
  GCTGGATGGT CCCCAGACCT CCCAGATCTA AGGCCCTCCC TGGCCACCTT CATATCTCCC
  TTAACAGTGC TGTTGGATTG GGGGCCAGCT TTATGCTTCC ATGATCCTCA GCTTCTTCCT
  AAAGGGACCC TGAATATAGA CCCAGTCACA CTGGGATACT AGCAGATGAA TTTGGGGGTG
  R
  ACTTAATTCA GTCTATAACA GCAGACAAAA AAAAAAAAAA AAAAAAAAAA GACGGGTGTG
  GTGGCTCAGC TGGCAGTTCC TGCTTTCGAG ATGTGAGATG TGGAAGAAGG AGGATCTGGA
  GTTCTATATA AGTAGTTGGG GCCAGCTTGA GATATATGAC AGCCTATATC AAAACAATAA
  CAACAAAAAT AAAAAGAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8752941	WI_WGS_6_85128547	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6346888					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:84208678 () rs orientation: forward

Symbol	Name	Function Class
Gm44127	predicted gene, 44127	within coordinates
Rr633014	regulatory region 633014	1235 bp distal
Rr633015	regulatory region 633015	521 bp distal
Rr633016	regulatory region 633016	155 bp distal