rs6346358 SNP Detail

Summary

• ID
  rs6346358
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:84208614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGCCAGGA GGGAGGATTA
  CGGAGCTGGG GTGCAGATGG TGGGAACCAG CCTTCACGGT CCACCTCTGC ACAGTGGCTT
  TCCTGCTGGA TGGTCCCCAG ACCTCCCAGA TCTAAGGCCC TCCCTGGCCA CCTTCATATC
  TCCCTTAACA GTGCTGTTGG ATTGGGGGCC AGCTTTATGC TTCCATGATC CTCAGCTTCT
  Y
  CCTAAAGGGA CCCTGAATAT AGACCCAGTC ACACTGGGAT ACTAGCAGAT GAATTTGGGG
  GTGGACTTAA TTCAGTCTAT AACAGCAGAC AAAAAAAAAA AAAAAAAAAA AAAAGACGGG
  TGTGGTGGCT CAGCTGGCAG TTCCTGCTTT CGAGATGTGA GATGTGGAAG AAGGAGGATC
  TGGAGTTCTA TATAAGTAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8752409	WI_WGS_6_85128483	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6346358					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:84208614 () rs orientation: forward

Symbol	Name	Function Class
Gm44127	predicted gene, 44127	within coordinates
Rr633014	regulatory region 633014	1171 bp distal
Rr633015	regulatory region 633015	457 bp distal
Rr633016	regulatory region 633016	91 bp distal