rs6251137 SNP Detail

Summary

• ID
  rs6251137
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127103442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         NTGCTGCCTT
  CTTGGAGATG GCATCTCTAA CTGAACTATT TTTGTTGGGG TTTTCTTTTG TAAAAACCTC
  AGGGTGGTGG GTAGCCTTTT GTGTGAACCA TATGGATGCC CCTTATTCTT CCCATAATTC
  TTCCCCTTAC AGTCTAACAT AAGGGCAAAG AAAATATTTG CACATGGATA CATACATATT
  TCTATTTGGT TGACAGNCTT AAGTGTTAAT TTCACTAGGC CAGAAGGTCA TACTTTGGGG
  K
  TTTTTTTGGt ttttggtttt tttgagacag ggtttctctg tatagatagc cctggatgtc
  ctggaactca ctctatagat caggctggcc tcgaactcag aaatccacct gcctctgcct
  cccgagtgct gggattaaag gtgtgtgcca ccatggcccg gcCTCTTTGG TTCAtttttg
  atgcagggtt tcgatgtgta acagccctgg ctatcctgga actcagtaag tagaccaagt
  aggttttgaa                                                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8656908	WI_WGS_2_128242050	WI	MOUSE	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6251137					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127103442 () rs orientation: forward

Symbol	Name	Function Class
Rr564482	regulatory region 564482	1848 bp distal
Tmem127	transmembrane protein 127	414 bp downstream
Tssr20002	transcription start site region 20002	592 bp upstream