rs6251061 SNP Detail

Summary

• ID
  rs6251061
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127103398 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCCCCTTAT TCTTCCCATA ATTCTTCCCC TTACAGTCTA
  ACATAAGGGC AAAGAAAATA TTTGCACATG GATACATACA TATTTCTATT TGGTTGACAG
  R
  CTTAAGTGTT AATTTCACTA GGCCAGAAGG TCATACTTTG GGGGTTTTTT TGGTTTTTGG
  TTTTTTTGAG ACAGGGTTTC TCTGTATAGA TAGCCCTGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J
ss8656832	WI_WGS_2_128242006	WI	MOUSE	f	SNP			A	G
ss45254344	mCV22837342	ABI	CRAMUS_MOUSE	f	SNP	A	A	A		G
ss147524737	ENSMUSSNP2055843	ENSEMBL	ENSEMBL_Sanger	f	SNP		A			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J
rs6251061					SNP	A	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127103398 () rs orientation: forward

Symbol	Name	Function Class
Rr564482	regulatory region 564482	1804 bp distal
Tmem127	transmembrane protein 127	370 bp downstream
Tssr20002	transcription start site region 20002	636 bp upstream