rs6214746 SNP Detail

Summary

• ID
  rs6214746
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:76420262 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGTTCGGG AGGTGGGAGC
  CCGCTCTGCT GCCCCAGGAG GAGGTTCTGT AGCAGCAGCG GTAGCAGCTC TGGTGAGCAC
  CTGAGGGAGG AGCTATAGAA GGCAGGACCC AGGATGGGGT GGGGCTTGCG GGGGCAGAGT
  AGGAGATCCT GGAGGGCAGG AATCAGGTTG GGGGACTCCG TAGTGGGGGA CCCTGCAGGC
  Y
  GAGACTCTAC AGTTCATCTC CCTGCACTTG TTCCTCGCTG AAGGACAGGG CAGTCCCTTG
  GCTAGGTTCT GCCACCCCCC CCTCCCATCT TTCCCCTTAT CAGGGTGCAG CCCTGGCTTC
  TATGGTGGGC CAGATGACCT ATGGCCGGCG CCAGTTTGAT CACTTGGATT CCACAATGCG
  ACGCCTGATC CCACCCTTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8620418	WI_WGS_10_77021535	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6214746					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:76420262 () rs orientation: forward

Symbol	Name	Function Class
Ftcd	formiminotransferase cyclodeaminase	Intron
Rr434292	regulatory region 434292	1801 bp proximal
Tssr94193	transcription start site region 94193	546 bp downstream
Tssr94194	transcription start site region 94194	528 bp downstream