rs6208864 SNP Detail

Summary

• ID
  rs6208864
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:66302315 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         ctactgatgg
  tcagatatat caatgaccaa gggttgttag ttcctgttat tttgatgttg TAGAATTTGC
  CTACATATAT AAGTATGCtg tagtggtata attaagaatg gcctccatag gctcatatat
  agactggctt ggccaccagt ctattatgga actCGCTGAT CTTCCCTAAA GTCAAGAGCT
  CCCCTAAAAC TTTTGCATAG CGAATTCCCA GAGTTCTGAA AATGATCATC TGAATCATTG
  Y
  AGTAAGCTTT ACTACTTAAA GAGAAGAGAA TTTCCAGAAN GCTTTATTCA TTTATTTCCT
  TAGATATCTT GAAAATACAA GTTCATTAAG ATTTTGAACC CAAAACCTCA AATTAATTGT
  GATATTTAAT TTTGAATCAC AAAAGAGTGG GCAGTTACTC TTAAGAATAA AAATCNTGAC
  AGGGTGAGgg tgatgcacac ctttaaccct agtactcagg aggcagagac aagaggatct
  ctgagtttgT                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8614519	WI_WGS_2_67228968	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6208864					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:66302315 () rs orientation: forward

Symbol	Name	Function Class
Gm13629	predicted gene 13629	within coordinates
Rr558187	regulatory region 558187	1316 bp proximal
Rr558188	regulatory region 558188	1411 bp proximal
Rr558189	regulatory region 558189	1770 bp proximal