rs6168536 SNP Detail

Summary

• ID
  rs6168536
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119336642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         TCCCAAGAAG
  AACAAGCCAA AGACCACTTT CTCTTGCAGA GGGGCCACAA AAGATATATT TGGGCGAAAC
  ATATAAAAGA TCCCCAGGCA CAGGAAGAAT ACACAACCTA GGAAAAGAAT GCAAGCAATG
  GATAAAATGC TCTCTGACAG GATAGTGTTG TACACCGCAT TTTCAAAATT TCCCAGAAGC
  AATAATACTA AAACCATAAA TTCTGTGAGG AAAAAAAATC TAAACAAAAT GTTTATCCAA
  R
  ATTTTAGTTT CCTTCCAATG CTGCTGGTGT CATATACCAT CATAAACTTT GAGCATAAAT
  AATANAGTAA CTagctgagg atgtagtgag tgcttcccag cgtgcacaaa ggtatggtgg
  cacacacctt aatcccagca cttgggagga agcaggagaa ttacaaattc aaagccaccc
  tcagcaacag aggaatctga ggtagcctgg gatctataag gctctgagaa agaaaaCAAG
  GTGGGGTGGG                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8574072	WI_WGS_6_120151990	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6168536					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119336642 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adipor2	adiponectin receptor 2			Intron
				Noncoding-Transcript-Variant
Rr637644	regulatory region 637644			962 bp proximal
Tssr62709	transcription start site region 62709			164 bp upstream