rs6151995 SNP Detail

Summary

• ID
  rs6151995
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127102576 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             GCTGTTGTAT CTGGGGGAAA GGTCATTCTC TCTAGATGAC TCCAAAATCT
  Y
  CAGCTGGTTT CTTACTCAGA GGTACCTGGG CCAGGACAGT ATGGAATACA           
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37629864	NES09011033	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T		T	T	C	T	C	C	T	C
ss45314444	mCV22837156	ABI	CRAMUS_MOUSE	f	SNP	C	C					C		T
ss147524722	ENSMUSSNP5858450	ENSEMBL	ENSEMBL_Sanger	f	SNP		C							T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs6151995					SNP	C	C	C	C	C	T	C	T	T	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37629864	NES09011033	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127102576 () rs orientation: forward

Symbol	Name	Function Class
Rr564482	regulatory region 564482	982 bp distal
Tmem127	transmembrane protein 127	mRNA-UTR
Tssr20002	transcription start site region 20002	1458 bp upstream