rs6151994 SNP Detail

Summary

• ID
  rs6151994
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127102521 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             AAGAGAGCTA TGTTGGGTAA GGACAGCAGA GAGAGGCCTC TGAAAACACA
  R
  AGTGGCTGTT GTATCTGGGG GAAAGGTCAT TCTCTCTAGA TGACTCCAAA           
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45311215	mCV22837147	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss147524717	ENSMUSSNP6130142	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs6151994					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127102521 () rs orientation: forward

Symbol	Name	Function Class
Rr564482	regulatory region 564482	927 bp distal
Tmem127	transmembrane protein 127	mRNA-UTR
Tssr20001	transcription start site region 20001	1974 bp downstream
Tssr20002	transcription start site region 20002	1513 bp upstream