rs586765253 SNP Detail

Summary

• ID
  rs586765253
• Variation Type
  SNP
• Alleles
  A/C/T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:67657572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCAT ACTCATAGTA AAGTGTAGAA
  H
  GTACAGATCT AATCACACAT TTGTC                                      
  
  H = A/C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J	KK/HlJ	LEWES/EiJ	LG/J	MA/MyJ	NON/ShiLtJ	NZB/BlNJ	NZW/LacJ	PL/J	SPRET/EiJ
ss918093506	MGP_WTSI_6_67680588	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	C	T	A	A	A	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J	KK/HlJ	LEWES/EiJ	LG/J	MA/MyJ	NON/ShiLtJ	NZB/BlNJ	NZW/LacJ	PL/J	SPRET/EiJ
rs586765253					SNP	T	T	C	T	A	A	A	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss918093506	MGP_WTSI_6_67680588	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:67657572 () rs orientation: forward

Symbol	Name	Function Class
Igk	immunoglobulin kappa chain complex	within coordinates
Rr379537	regulatory region 379537	1331 bp upstream
Rr631677	regulatory region 631677	875 bp proximal