rs52451780 SNP Detail

Summary

• ID
  rs52451780
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:155873811 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCAT TTATACACGC TCTGAAAAGT
  C
  CCCAGAATTC CAAATGTCAC ACAAT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148115624	ENSMUSSNP4423252	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52451780					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155873811 () rs orientation: forward

Symbol	Name	Function Class
Ankrd65	ankyrin repeat domain 65	1085 bp upstream
Gm55808	predicted gene, 55808	227 bp upstream
Rr377468	regulatory region 377468	689 bp upstream
Rr606572	regulatory region 606572	658 bp distal
Rr606573	regulatory region 606573	230 bp distal