rs52432645 SNP Detail

Summary

• ID
  rs52432645
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:62302257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACCA AACAACCAAA CACCGCTCCC
  Y
  CTTCCCCAGC AATCCCCCCA TCCCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss135231352	ENSMUSSNP7195180	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52432645					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:62302257 () rs orientation: forward

Symbol	Name	Function Class
Arhgef26	Rho guanine nucleotide exchange factor 26	Intron
Rr577516	regulatory region 577516	213 bp distal
Rr577517	regulatory region 577517	643 bp proximal
Rr577518	regulatory region 577518	1263 bp proximal
Tssr889	transcription start site region 889	1586 bp upstream