rs52314807 SNP Detail

Summary

• ID
  rs52314807
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:167118654 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TTCGAGGCCA GCCTGGTCTA CAAAGTGAGT TCCAGGACAG
  CCAGGACTAT ACAGAGAAAC CCTGTCTCGA AAAACTAAAA ACAAAAAAAC AAAACAAAAC
  M
  AAACAAAAAA AAAAACAACT ACCATTTGCT GGGGGCTGGA GACAACTGTT AAGCACACTG
  ACTACTCTTC CTGAGTTCAA CTCCCAGCAT CCACACAGTG G                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146036388	ENSMUSSNP4385997	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52314807					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:167118654 () rs orientation: forward

Symbol	Name	Function Class
Gm57182	predicted gene, 57182	within coordinates
Mir6347	microRNA 6347	860 bp downstream
Rr422672	regulatory region 422672	623 bp distal
Rr422673	regulatory region 422673	1141 bp proximal