rs52196322 SNP Detail

Summary

• ID
  rs52196322
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:98220358 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCCAGTGCT TCCCCCCCCC CCCCAGTGGT TAAGAGCACT
  GACCATTAAA GATTTATTAA CCTGCTCCTG GAAATATGCC ACTAGCCTTG AAGACAGCCC
  Y
  CACTGAATAT ATCATTTTAG AATTGTTACA TTTTTTAAAA TATTTTTATT ACATATTTTC
  CTCAATTACA TTTCCAATGC TATCCCAAAA GTTCCCCAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147087510	ENSMUSSNP4354360	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52196322					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98220358 () rs orientation: forward

Symbol	Name	Function Class
0610025J13Rik	RIKEN cDNA 0610025J13 gene	161 bp downstream
Rr595725	regulatory region 595725	180 bp distal