rs52110842 SNP Detail

Summary

• ID
  rs52110842
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:94036512 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TGTGTAAGCC AGACTTATGT GGCTGCAAGT TGGTGCCCCA
  GACGTTTGCA TCTTATTCTG TAACATTTTC TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT
  G
  TTTTTTTTTT GAGACAGGGT TTCTCTGTGT AGCCCTGGCT GTCCTGGAAC TCACTCTGTA
  GACCAGGCTG GCCTCGAACT CAGAAATCCG CCTGCCTCTG C                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147385176	ENSMUSSNP5816185	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52110842					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:94036512 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2124	CpG island 2124	1098 bp distal
Ndufa12	NADH:ubiquinone oxidoreductase subunit A12	Intron
Rr369048	regulatory region 369048	1632 bp downstream
Rr437404	regulatory region 437404	1636 bp distal
Rr437405	regulatory region 437405	1671 bp distal
Tssr95308	transcription start site region 95308	1607 bp downstream