rs52063762 SNP Detail

Summary

• ID
  rs52063762
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16715993 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCC TTCTTCCCTC CTGAATGCTA
  R
  GAATAAAGGT GTTTGGCTCC GCCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss148401815	ENSMUSSNP2045321	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss322112157	CHEV_7_17567417	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs52063762					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16715993 () rs orientation: forward

Symbol	Name	Function Class
Pnma8c	PNMA family member 8C	1015 bp upstream
Rr642834	regulatory region 642834	1262 bp distal
Rr642835	regulatory region 642835	528 bp proximal
Tssr64666	transcription start site region 64666	997 bp upstream
Tssr64667	transcription start site region 64667	1105 bp upstream