rs52020063 SNP Detail

Summary

• ID
  rs52020063
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:128160247 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCTGACCAT TCAAGGCATT GGCTCTGGCA AGGACATCAT
  GTCAAATGGC ACACTGTGTC AAAGGTGGTG CATACAGCAA AGGACTCAAA GAAGGCATCA
  S
  GGTCTCATCT AGCAATCTGT CCCTACAAGA ATTGACCCAG TCACATCCTA ACTGCCTCCT
  ACTAGGCTCC ACCCCTTAAA GGTCCCTCCC CCTTAGCGC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147557046	ENSMUSSNP6717841	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52020063					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:128160247 () rs orientation: forward

Symbol	Name	Function Class
Morrbid	myeloid RNA regulator of BCL2L11 induced cell death	within coordinates
Rr564705	regulatory region 564705	within coordinates
Rr564706	regulatory region 564706	581 bp proximal
Tssr643	transcription start site region 643	884 bp upstream
Tssr26157	transcription start site region 26157	552 bp downstream