rs51493497 SNP Detail

Summary

• ID
  rs51493497
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16716428 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCATGGCAT CAGGCATGCA
  TGTGCTACAC AGACATACAA GCAGACAAAA CACTCAGACA TAATATATAA AAAGCATTTA
  AAAAGGAACG ATTTTTAAAA ATAACTTTCC ACCTGTGTAT GTATTTACAT GGCTCCACCT
  GTTCTTAGTT TATTCAGGAA GTATTAATGT TTGTTACTGT CTGTTACAAT CTGTTGATTT
  K
  AACATCAATG CTCAGGCAGG AGTGTTTCCC AGCTGGTAGA TGCTTTCCTG CCATGCTAGG
  AGCCTGGTTT CCATCCTCAG AGCTACAATA GACCAGGCAC TGCTCGCTGT AGGCATGTAG
  TAGCCCTGGA TCTTGAGAAG TGGAGGCAGG AGGATCAGAA GTCCAAAGTT CTGGTTATAT
  AGCAAATTCA AGACCAGCCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148401859	ENSMUSSNP53269	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51493497					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16716428 () rs orientation: forward

Symbol	Name	Function Class
Pnma8c	PNMA family member 8C	580 bp upstream
Rr642834	regulatory region 642834	1697 bp distal
Rr642835	regulatory region 642835	93 bp proximal
Tssr64666	transcription start site region 64666	562 bp upstream
Tssr64667	transcription start site region 64667	670 bp upstream